Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03569 ATGGGAACTTCTTGTGAAGAAGCTCCAACTCTTCTTCAAGACCTGAAGGTGACCATTCACGAAACTTCAATCGTTTTTCCATCCAAGAAAACAGAGAAGTCCTTGTTCTTATCAAACATAGACAAGGTCCTCAATTTCGACGTGGAAACGGTTCACTTCTTTGCTGCAAACAAAGATTTTCCTCCCCAAATAGTGGCCGAGAAGCTAAAGAATGCCCTTGAAGATGCTCTAGTGGCTTATGACTTCTTAGGTGGAAGATTGAAGCTGAACTCTGAAACAAGCAGGTTAGAGATGGATTGCAATGCAGAAGGTGCTGGTTTTGTTGTGGCTTCTAGTGAATACAAATTGGATCAAATAGGGGACTTGGTTTATCCCAATCCAGCTTTTGCACAATTTGTTCACAAGACTAAGGATTTCCTTAAACCAGGTGATCAGCCACTATGTGTTGTCCAGCTGACATCCTTCAAGTGTGGTGGCTTTGTAATTGGTTTCACAACTAGCCATACCACCTTTGATGGGCTTAGCTTCAGGATTTTCTTGGACAACCTTGCTGCATTGGCTTCTAACAGGCCACTAGCTGTGACCCCCTGCCATGACAGGCAACTCCTAGCCGCACGATCTCCTCCACGTGTCAGCTTCCCGCACCCTGAACTGATCAAGCTGGATAACCTCCCCTCAGGCCTTGAATCCGGTGTCTTTGAGGCCTCCACAGAAGAACTTGACTTCAAGGTTTTTAGGCTAACATCTCAAAATATCATGAACCTCAAGGAAAATGCTAAGACCAATAATAGTGGGACACGTGTCACCGGCTTTAACACTGTCACCGCTCATATATGGAAATGCAAGGCTTTATCTGGACCCTATGATCCTAACAGGTCATCCACTATACTCTATGCTGTGGATATTCGTTCAAAATTGAACCCTCCATTGCCTAAATCGTATGCTGGGAATGCTGTTTTAACGGCACATGCTACTGCAAAGTGTGAGGAATTGGAAAATGGTCCATTCTCAAGGTTGGTGGAGATGGTGGCAGAGGGTGCAAAGAGAATGAGTGATGAGTATGTAAGGTCTATTATAGATTGGGGAGAGTTGTATAATGGTTTTCCAAATGGAGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAAGAAGTGGAGTATCCTTGGGGAAAGCCAAAGTTTTGTTGTCCTGTGGTGTATCATAGGAAGGATATTATACTGCTGTTTCCTCTTATTGGTGGTGGTGGTGATGATGGGGTAAATATTATAGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCGAGAGTCTCTTTTACAAGTTCTTGATTTGA 1335 0.4367 MGTSCEEAPTLLQDLKVTIHETSIVFPSKKTEKSLFLSNIDKVLNFDVETVHFFAANKDFPPQIVAEKLKNALEDALVAYDFLGGRLKLNSETSRLEMDCNAEGAGFVVASSEYKLDQIGDLVYPNPAFAQFVHKTKDFLKPGDQPLCVVQLTSFKCGGFVIGFTTSHTTFDGLSFRIFLDNLAALASNRPLAVTPCHDRQLLAARSPPRVSFPHPELIKLDNLPSGLESGVFEASTEELDFKVFRLTSQNIMNLKENAKTNNSGTRVTGFNTVTAHIWKCKALSGPYDPNRSSTILYAVDIRSKLNPPLPKSYAGNAVLTAHATAKCEELENGPFSRLVEMVAEGAKRMSDEYVRSIIDWGELYNGFPNGEVLVSSWWRLGFEEVEYPWGKPKFCCPVVYHRKDIILLFPLIGGGGDDGVNIIVALPPKEMEKFESLFYKFLI. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03569 444 Gene3D - 13 219 IPR023213 -
Seca1g03569 444 Pfam Transferase family 15 440 - -
Seca1g03569 444 Gene3D - 230 442 IPR023213 -
Seca1g03569 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03569 Seca-Chr1 103225538 103229999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03569 15 441 Monolignol Biosynthesis Gene Families AT5G48930 29.646 4.73e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03569 K13065 - gmx:100780971 716.072