Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03553 ATGTTCAGCAACAGAAGTACCCTGAATGTCCAACCTGATGCAGTAGCTATTATTGATGGAACCCAAGAAGGTTCTTATCTGTGGGTGACAGTTAATTATTTACTGGGAAAGTTGGGAAAGAAGTTTTCAAAGACAGTGGGAGTAATTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCCGTCTCAAGGAACACAGCTAAAAATGCTCCAAAAGTCCCAGATGGAGAGGATCCATACATAAAGAAGATTGTGCTCAAGGGAAAGAAATATGACCTCTATGTTCACAGTTACTTGCACTTTGGCAGAGAAGCATCTCGTGCAGAGATTTTGAAAGTCACCGATGGTTCTGCTAACCCTTGCATTTTAGCTGGCTTTGATGGTACCTATACATATTCAAAAACAGAGTATAAGGCCTCATCCCCTGCATCAGGCTCCAACTTAGAAGAATGCAGAGAGATAGTTCTTAAGGCTCTCAAAGTGAATGAGCCATGTCCCCATCCTAATTGCACTTTTGGTGGGATATGGAACGGTGGAGGAGGAAGTGGACAGAAAACTATTTTTGCTGCTTCATCTTTCTATTACCTTTCTGCAGATATTGGAATCGTTGACCCAAACAAACCCAATTCCAAAATTCGTCCGGTGGATCTTGAGAGTGAAGCAAAGCGAGCTTGTAAAACAAAACTTGGGGATGCCAAATCCATATATCCACTTCTTGCGGAGAATATACTTCCATATGTATGCATGGATCTTGTGTATCAGTACACATTGCTCGTTGAAGGATTTGGCCTAGATCCATGGCAAGAGATTACAGTGGGGAAGGAAATTGAATATCAGGATGCAATTGTTGAAGCCGCATGGCCTTTAGGCAATGCTATAGAAGCCATATCATCACTGCCTAAATTTGAGCGATTAATGTATTTTATTTAA 930 0.414 MFSNRSTLNVQPDAVAIIDGTQEGSYLWVTVNYLLGKLGKKFSKTVGVIDLGGGSVQMAYAVSRNTAKNAPKVPDGEDPYIKKIVLKGKKYDLYVHSYLHFGREASRAEILKVTDGSANPCILAGFDGTYTYSKTEYKASSPASGSNLEECREIVLKALKVNEPCPHPNCTFGGIWNGGGGSGQKTIFAASSFYYLSADIGIVDPNKPNSKIRPVDLESEAKRACKTKLGDAKSIYPLLAENILPYVCMDLVYQYTLLVEGFGLDPWQEITVGKEIEYQDAIVEAAWPLGNAIEAISSLPKFERLMYFI. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03553 309 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 3 299 IPR000407 GO:0016787
Seca1g03553 309 Pfam GDA1/CD39 (nucleoside phosphatase) family 4 301 IPR000407 GO:0016787
Seca1g03553 309 Gene3D Exopolyphosphatase. Domain 2 19 277 - -
Seca1g03553 309 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 18 33 IPR000407 GO:0016787
Seca1g03553 309 FunFam Apyrase 1 19 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03553 Seca-Chr1 102472723 102479384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03553 1 298 Calmodulin-binding Proteins AT3G04080 56.856 2.61e-115 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03553 K14641 - gmx:100781628 525.398