Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03549 ATGGTGACCATTAACTATCTATTAGGGAACTTGGGAAAAAAGTTTTCAAAAACAGTTGGAGTAGTTGATCTTGGAGGTGCATCAGTTCAAATGACATATGCTGCCTCTAGGGACACGGCTAAAAATGCTCCCAAAGTGAAAGATGGCGAGGATCCATACATAAAGAAAGTTGTACTCAAGGGGAAGAAATATAACCTCTATGTTCACAGTTATTTGCGCTATGGTAGAGATGCATCTCGGGCCCAGATTTTCAAGGTCACTGATGGTTCTCCTAATCCTTGCATTTTAGCTGGCTTTGATGGGACCTACACATATTCGGGAGAAGAATATAAGGCCTTTGCCCCCACATCTGGCTCCAACTTTGAAGAATGCAGAAAGATAGTTCTTAAGGCTCTCAAAGTGAATTCTCCATGTCCCCATCCGAATTGCACATTTGGTGGAATATGGAACGGTGGAAGGGGAAGTGGACAGAAAGACCTTTTTGTTACTTCATCCTTCTTTTACCTATCTGCAGATGTCGGTATCATTGATCCAAATAAACCCAATTCCAAAATTCATCCTGTGGATCTTGAGAATGAAGCTAAGCGTGCTTGTGAAACAAATCTTGAGGATGCCAAATTCACTTATCCACTTCTTGCAAAGACGAGACTTCCATATGTATGCATGGATCTTATGTATCAGTACACGTTGCTCGTTGATGGATTTGGCCTGGATCCCTTGCAAGAGATTACAGTGGCGAAGGCAATTGAATATCAAGATGCTCTTGTGATAACAGCATGGCCTCTAGGCAATGCCATTGAAGCCATATCATCGTTGCCTAAATTTGAGAGATTAATGTATTTTATTTAA 849 0.4122 MVTINYLLGNLGKKFSKTVGVVDLGGASVQMTYAASRDTAKNAPKVKDGEDPYIKKVVLKGKKYNLYVHSYLRYGRDASRAQIFKVTDGSPNPCILAGFDGTYTYSGEEYKAFAPTSGSNFEECRKIVLKALKVNSPCPHPNCTFGGIWNGGRGSGQKDLFVTSSFFYLSADVGIIDPNKPNSKIHPVDLENEAKRACETNLEDAKFTYPLLAKTRLPYVCMDLMYQYTLLVDGFGLDPLQEITVAKAIEYQDALVITAWPLGNAIEAISSLPKFERLMYFI. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03549 282 FunFam Apyrase 1 1 250 - -
Seca1g03549 282 Gene3D Exopolyphosphatase. Domain 2 1 250 - -
Seca1g03549 282 Pfam GDA1/CD39 (nucleoside phosphatase) family 2 274 IPR000407 GO:0016787
Seca1g03549 282 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 272 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03549 Seca-Chr1 102346392 102348562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03549 2 271 Calmodulin-binding Proteins AT3G04080 55.720 1.07e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03549 K14641 - gmx:100781628 464.151