Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03538 ATGGTTTTGCAGTGGCCACAGACTAAGACCATGGACTTCTTAACATTCATCACTTTTGCGCTCTTGTTAATGCCTGCAATCTCTTCTTCCCAGTGTCTTAGGAACAACATACTACTCAGTCACCGTGAGATATTACCCATACAGGAAACCAATATTACTTCTTACGCTGTGATATTTGATGCTGGTAGCACGGGCAGTCGTGTGCATGTCTTCCATTTTGACCAGAACTTAGATCTCCTTCAAATTGGCCAAGATCTTGAGTTTTATGATAAGGTGAGAGATTACTCTTTGATGGCTTTAATTGCTTAA 309 0.4078 MVLQWPQTKTMDFLTFITFALLLMPAISSSQCLRNNILLSHREILPIQETNITSYAVIFDAGSTGSRVHVFHFDQNLDLLQIGQDLEFYDKVRDYSLMALIA. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03538 102 Pfam GDA1/CD39 (nucleoside phosphatase) family 50 90 IPR000407 GO:0016787
Seca1g03538 102 Gene3D - 43 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03538 Seca-Chr1 102010159 102010467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03538 54 93 Calmodulin-binding Proteins AT3G04080 60.000 1.90e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03538 K14641 - gmx:100781628 116.316