Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03431 ATGGTTACCATCCACAGTTCCTACACGGTGATCCCCTCTGAGTCTACACCATCATCAACACTCCCTCTTTCCAATTGCGATCAAATCAAGCTCCCCAACCATGGCTGTCAACTTTATCTCTACACACCCACACCCACCACCACCAACGATTCATCTTTCAACTCTTTGATGCACAATTTCAGAACCTCTCTCAGCAAAGCATTGACTCACTACTACCCCTTTGCAGGTCGATTATGCTGGATCCAAGGTGGACGCTTGGCACTCCTTTGCAACGCTAAAGGGGCGCAACTCTTTGAAGCTACCTCTGATTCCCCTTTGGAAGATTTGGATAATTTTGGTGCTACCCATTTCGTCGAACAACTGGTGCCAAAAATTGACTATGATGTCCCTCTTGATGAAGTACCCTTGTTGGTTGTTCAGCTAACCAGGTTCCCCTGTGGTTCACTCACTTTAGGAGCTGCTCTGTGTCGTGCTGTGGTTGATGGAGCCTCTGTTACTAATTTCATGAACTCATGGGCCAAACTAGCCAGAGGAGAGAGTTTAGATTCGAATTTCATGCCACTTCTTGATCGAACTTTGTTAGATTCGAGAAGATTCCATATGGCACCACGTTTTGAACACCCTGAGTTTTCTCCATCACCCCTTTGGGAAGGTAGCTCCAACGTGATGAAATTGAAACCAAAGCTTGCAACAATCATCTTCAAACTCACCAAAGACCAAGTTGAGAAACTGAAGAAAAAAGCCAACAACAACAACAAGAATAAAAACAAGATACGAGGTTACACTAGTTTTGAGGTTATAAGTGGTCACTTGTGGAGATGTGTTTGCAAGGTGAGGTATTCAGGGAATTGGAACCAGCCAACAAGGTTAACCACTTTGGTGAATTGTAGAAACAGGTTGAACCCTCCTCTTCCTAATGCTTATTTTGGGAATGCAACGTTTCCTACAGTGACACCAACTTGTTCCTTTGATGATGTTGTGAACAAGCCTTTGAGTTATTCTGTTGGGAAAATAAGGGAAGCTGTTGAGAGAATGAGTGATGAGTATGTAAGATCTGCTCTTGATTATATAGCAAATCAGAAGGACATGAATTTGTTGAGGGATACTTTTTATAACTCTGCAGGGAAAGGGGGGAAATTCAGGGGAGACCCCAATTTATATGTGGTTGGTTGGGCTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAACACCTGTTTGTTTGGTTCCCGGGGGCATTAATTCTGATGGTAAGGCTTTCATTCTTAATACAGGAAGTGGTGATGGGTTTATTGTGGCCATTTGTTTGCAACCTTCACATGTTGATGCTTTGAAGAAGTTGTTTTATGAGGATATGGAGACTACTACTTCCAAGTTGTGA 1383 0.4302 MVTIHSSYTVIPSESTPSSTLPLSNCDQIKLPNHGCQLYLYTPTPTTTNDSSFNSLMHNFRTSLSKALTHYYPFAGRLCWIQGGRLALLCNAKGAQLFEATSDSPLEDLDNFGATHFVEQLVPKIDYDVPLDEVPLLVVQLTRFPCGSLTLGAALCRAVVDGASVTNFMNSWAKLARGESLDSNFMPLLDRTLLDSRRFHMAPRFEHPEFSPSPLWEGSSNVMKLKPKLATIIFKLTKDQVEKLKKKANNNNKNKNKIRGYTSFEVISGHLWRCVCKVRYSGNWNQPTRLTTLVNCRNRLNPPLPNAYFGNATFPTVTPTCSFDDVVNKPLSYSVGKIREAVERMSDEYVRSALDYIANQKDMNLLRDTFYNSAGKGGKFRGDPNLYVVGWANFAFYATDFGWGTPVCLVPGGINSDGKAFILNTGSGDGFIVAICLQPSHVDALKKLFYEDMETTTSKL. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03431 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 447 - -
Seca1g03431 460 MobiDBLite consensus disorder prediction 1 21 - -
Seca1g03431 460 Gene3D - 218 451 IPR023213 -
Seca1g03431 460 Coils Coil 234 258 - -
Seca1g03431 460 Pfam Transferase family 1 450 - -
Seca1g03431 460 Gene3D - 1 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03431 Seca-Chr1 98505494 98506876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03431 2 451 Monolignol Biosynthesis Gene Families AT5G48930 36.726 5.82e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03431 K13065 - gmx:100819383 538.495