Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03308 ATGACTCATGAGAACAATTGTGGGAAGCTTTGGTTCTGTTTCTGTGGCTTTGATTTCAAACACAAAAGGTCCTTTAAAGACCACGTTTGTACCTTCGGTGATGGACATGTTCCATACACTGTTGAGAGCTGTGATCAACAAGACATATTAGGGGATGAAGAGGATGATGAATTAGAAGGAGATGAAGATGAAGATGAAGATGATAACAACACCAACAACAATGACAGTGGAATGATGTTTGGTTTTAATTAA 252 0.381 MTHENNCGKLWFCFCGFDFKHKRSFKDHVCTFGDGHVPYTVESCDQQDILGDEEDDELEGDEDEDEDDNNTNNNDSGMMFGFN. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03308 83 PANTHER ZINC FINGER PROTEIN WIP2 2 62 IPR043584 GO:0003700|GO:0010468
Seca1g03308 83 MobiDBLite consensus disorder prediction 44 83 - -
Seca1g03308 83 MobiDBLite consensus disorder prediction 47 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03308 Seca-Chr1 92688618 92688869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03308 2 43 C2H2 Transcription Factor Family AT1G51220 71.429 1.37e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03308 - - adu:107490921 87.4261