Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03268 ATGCAGCATCTAAGCTGTTTTTGGATACAGGATTTCCCAGATGGTAAATTTCCTGCTGGAGGGAAATCTGACATAGAAGGCATCTTCCCTCCACCTTACTTTGAGTGGTTTCAATTCAACAAGGACTTCACGGAGTACACTAACTTGGAAGAATGCCTCTCTTACTTGTGCGAATACATCACAGCAAATGGCCCCTTTGATGGTTTCCTTGGCTTCTCACAGGGCACAACACTTTCAGCACTCTTGATAGGTTACCAAGCACAGGGAAAGTTGCTAAAGGAGCATCCGCCCATAAAGTTTTTTATAGCAATATCAGGGTCAAAATTCAGAGATCCCAGCATATGCGATGTTGCCTACAAGGACATCATCAAAGCTAAATCTGTTCACTTCATTGGCGAAAAAGATTGGTTGAAACTGCCTTCTGAGGAGCTTGCCTCTGCATTTGAGAAACCCCTTATAATAAGGCATCCCCAAGGTCACACTGTCCCACGATTAGGTATGTTCTCTCTCTCATAG 516 0.438 MQHLSCFWIQDFPDGKFPAGGKSDIEGIFPPPYFEWFQFNKDFTEYTNLEECLSYLCEYITANGPFDGFLGFSQGTTLSALLIGYQAQGKLLKEHPPIKFFIAISGSKFRDPSICDVAYKDIIKAKSVHFIGEKDWLKLPSEELASAFEKPLIIRHPQGHTVPRLGMFSLS. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03268 171 Pfam Serine hydrolase (FSH1) 12 165 IPR005645 -
Seca1g03268 171 Gene3D alpha/beta hydrolase 7 169 IPR029058 -
Seca1g03268 171 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 11 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03268 Seca-Chr1 91577595 91579706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03268 44 163 Sulfurtransferasese or Rhodanese AT1G09280 32.283 1.09e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03268 - - lang:109358326 308.531