Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03251 ATGGATGTGGAGTATGTGGAAAGTTCTGCTGGTAAGAATATAGAAGACCATGAGACTGATAATATAGTTTCTAATGATTTAGAAACTAATTTGGAAAATATTTCAACCGATGAGGCTATAATTGATGAGTATCCTAATCTCAGTCCTTGTGTTGGTATGGAGTTCAATTCTCTTACGGATGTTAAAGAATTGTACACATCATTTGCCAAGAAAGCGGGTTTTGGAATTCGTACCCGTTCAACTAAAGAAAATTTTTGTATACTTCTATGTTCCAATGAAGGCAAACATATAGTAAATAGTGGAAGTGAAGAAGAATGCAATGTTTGCACAGGAAAGACTAAGAAAAAGTGCTCAACTTCAACAATAAATTGTAAGGCATCACTAGTAGTTTCGAAAGCATGGGAAAGAAGTAAGTGGGTTATCAAGAGTTTTAATAATGTTCATAATCATGACATGATTAGCCCTAAGAGTGTGAGCTATCTTCGGTGTCATAAAAAAATGAGTAAAGCGGCTAAGAACCTTGTTGAGAAGTTTGATGAAAAAGGGGTACCAACAGGAAAGGTTGCTGCAATGTTTAATGCGATGGATAGTCGTTATGAAAAAGAAAGAAAAGAAGATTTTGAATCGAGGCACCGATCACGTCTCTTAGATATCAAATCAAAAATTGAGGAGCATGCTGCATCAATTTATACAAGAACCATTTTTGGGAAATTTCAGGATGAGCTTGTGAGGGTTAAACAATTCACAAAGGAGAAAATTGAAAAAAAAATGGGTCTCAATATACATATAAGCATGCATGTGAATACTCAGGCCAATCTATTGTTTGATCTTGCTGCAAAATCTGAGAAGTTATACATGTTGATATCATTTGATTTGGAACAAACATACAAAAGAGCTGTGACAATGTATTTTGAGGTGCAAACAAAAAATGATGCAATTCCTTTAGAGGCTAGTTGTCAAAATTTGACAAGTGAGCAGGTAAGCGTGTCCCCATCATCAAATATTGGAGATCCGCTAATGTCACAAACTAAAGGAAGGAAAAAGGATATAATGAAAGAGACTCAACAAGGAAGAATAAAAAGCAGACTAGAGTTGTCAATAAATCGATCACTGGTCAAAAGGAGATCATGCCAAATATGTGGACAACATGGTCATAATTGA 1161 0.3514 MDVEYVESSAGKNIEDHETDNIVSNDLETNLENISTDEAIIDEYPNLSPCVGMEFNSLTDVKELYTSFAKKAGFGIRTRSTKENFCILLCSNEGKHIVNSGSEEECNVCTGKTKKKCSTSTINCKASLVVSKAWERSKWVIKSFNNVHNHDMISPKSVSYLRCHKKMSKAAKNLVEKFDEKGVPTGKVAAMFNAMDSRYEKERKEDFESRHRSRLLDIKSKIEEHAASIYTRTIFGKFQDELVRVKQFTKEKIEKKMGLNIHISMHVNTQANLLFDLAAKSEKLYMLISFDLEQTYKRAVTMYFEVQTKNDAIPLEASCQNLTSEQVSVSPSSNIGDPLMSQTKGRKKDIMKETQQGRIKSRLELSINRSLVKRRSCQICGQHGHN. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03251 386 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 206 - -
Seca1g03251 386 MobiDBLite consensus disorder prediction 328 348 - -
Seca1g03251 386 Pfam FAR1 DNA-binding domain 64 152 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03251 Seca-Chr1 91238170 91240425 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03251 FAR1 3.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03251 - - mtr:112420966 231.491