Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03248 ATGGAGGAAGTTGACGGCCACATTTCTGAGACAGAGACAACGATGAATAGTGTTGACCAAACACATGAGCAGTGTAGGAATGATGATTCAGTTACCAATGGAGAGACCGGTGAAGAAGGTGAAGATGGAGTTCCGTTTACCGATGGTCCTACCGTTATTGATAGCGATGATAGTTGTGGTGAAAATGAAAGTGGGGATAAATATAGGATTGATGGAGAGGATGACATTAGAAAAGTTGACTTGATTATGTTAAGTGAAGAAGAGTTCAAGATGTACCATTTCAGCAGTCGATTGGTTGCATTTCAGTTTTACAATAAGTATGGTGAGAAAAGGGGATTTGCTGCTCGAAGATGGAACACAGTTGTAAACAAGGAAGGCATAGTGTCACAACAAACATTTGTGTGTTTTAGAGAAGGTTATCGATTGAAAAAACATTTGAAGAAGGAGAATCGTAAGAGGGAGGCGAGAGCAATTACTAGGTGTGGTTGTTTTGCTTACCTGAAAGTTCGATTTGCACGCGAGTTAGCAGGGTGTAGTAGAGGCAATAGGAGGACCACCACATGTAGTATTTGCAAAGGCCGGGGGCATAACAAACAGACTTGTAGACTTCGTCAAAGGCAAGCACCGTCAGAGACAATTGAAACAGCTGCAAGTGGAGATGACAGGAATGAGTAA 675 0.4207 MEEVDGHISETETTMNSVDQTHEQCRNDDSVTNGETGEEGEDGVPFTDGPTVIDSDDSCGENESGDKYRIDGEDDIRKVDLIMLSEEEFKMYHFSSRLVAFQFYNKYGEKRGFAARRWNTVVNKEGIVSQQTFVCFREGYRLKKHLKKENRKREARAITRCGCFAYLKVRFARELAGCSRGNRRTTTCSICKGRGHNKQTCRLRQRQAPSETIETAASGDDRNE. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03248 224 MobiDBLite consensus disorder prediction 202 216 - -
Seca1g03248 224 MobiDBLite consensus disorder prediction 202 224 - -
Seca1g03248 224 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 170 - -
Seca1g03248 224 MobiDBLite consensus disorder prediction 1 67 - -
Seca1g03248 224 Pfam FAR1 DNA-binding domain 102 172 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03248 Seca-Chr1 91039108 91042257 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03248 FAR1 8.9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03248 - - mtr:120580664 110.923