Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g03227 | ATGATGTTTATAGAGAATTCATTTTGGTTGAAGTTTCGTTCCGAAATTAATCATCGCAAAGTTATCCTAAGGGACCCTGCTGACTTTATTTTTAATGTTTCTATAAGTTGCAATGGGTATAATAGGGTTGGATTTATTAATGGAGTTGAAAACATCATTAGGCGCTATAACGTTGTTGAGAGTTACTGGGTGTTATTTACATATAAAGGGAACAATGAGTTTGACATTAGATTAGTAAAGGGAACATTGAAGGTCAATTATCCTTGGGTGGAAAGGGATGAAGATGTTGATGTCCATCCTATGGAGTATGAGGAGGACCTTGAGGAGCCCCTATTTTTGTGGGAAGTTACTTTGACAAAGGCAGCTGCATCCGGTGGTAATGCTTTGCTCATACCTGCTAGGATTGTGAGGGACATGTTGGACAAGAATCAGGAAGTTGTGACTGTTATAGATGAGGGTGGTAAATTAATTCCATGCAAGTTGCTGAAGCCTAAAAGACGACCAAGTGAGCGGTACCTATCCGGTGGATGGTATGAGTTTATTCGGGGAAAGAAATTGAAGGTTGGGGATAAGATTAGATTTTACTCAGATGACAGTATGGAAACTATGTCTGTGTTGTTGATCGCATTTGACTTGATGTTTGAAAAAAATTTGCAGTTCTAA | 663 | 0.3861 | MMFIENSFWLKFRSEINHRKVILRDPADFIFNVSISCNGYNRVGFINGVENIIRRYNVVESYWVLFTYKGNNEFDIRLVKGTLKVNYPWVERDEDVDVHPMEYEEDLEEPLFLWEVTLTKAAASGGNALLIPARIVRDMLDKNQEVVTVIDEGGKLIPCKLLKPKRRPSERYLSGGWYEFIRGKKLKVGDKIRFYSDDSMETMSVLLIAFDLMFEKNLQF. | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g03227 | 220 | SMART | B3_2 | 114 | 213 | IPR003340 | GO:0003677 | |
Seca1g03227 | 220 | SUPERFAMILY | DNA-binding pseudobarrel domain | 7 | 78 | IPR015300 | - | |
Seca1g03227 | 220 | Pfam | B3 DNA binding domain | 115 | 205 | IPR003340 | GO:0003677 | |
Seca1g03227 | 220 | CDD | B3_DNA | 110 | 208 | IPR003340 | GO:0003677 | |
Seca1g03227 | 220 | ProSiteProfiles | B3 DNA-binding domain profile. | 114 | 211 | IPR003340 | GO:0003677 | |
Seca1g03227 | 220 | SUPERFAMILY | DNA-binding pseudobarrel domain | 110 | 203 | IPR015300 | - | |
Seca1g03227 | 220 | Gene3D | - | 101 | 210 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g03227 | Seca-Chr1 | 90571626 | 90574313 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Seca1g03227 | B3 | 2.3e-09 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g03227 | - | - | mtr:11425977 | 65.4698 |