Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03212 ATGGGAAAGGCCGAAGAAGAACAGCAACCGTTGCCACGTGGCGGTTCCTCCGCGGATCCGCCGCAGAATGCGGACGCAGTGTGTCGGTGCAGGTGTTCTCGGATTCGGAAACTCGTCGGTGTCAGATGCATTCTCGTACTGCTCTTGTCTGTTGCCGTTTTCCTCTCTGCCTTGTTTTGGTTGCCCCCTTTTCTTCGCCTCGCAGATCAGAAAAATCTCCATGATGGTTCCAGATATAAAGGCCATGATATTGTTGCAAGCTTTATTGTTAATAAGTCAGTCTCTTTGCTAGAAGATAACATCTTGCAGCTCACGGATGAAATTTTTGATGAGATCGAAGCTCCCTCAAAAATCCAGGTGGTCACCTTGTCTCTAGATCCCTTACCTGGGCCAAACAAGACAAAAGTAGTGTTTGCAGTTGATCCTGATGGTGAATACTCTTCAGCAGCCATTAGTTTGATAAGAGCATCATTTACATCCCTGGTTTTACACCAATCAATTCTTCGGCTCACTTCATCCTTGTTCGGAGATCCCTTCTTTTTCGAAGTGCTAAAATTTAAGGGAGGAATTACAATAATTCCACAACAGAATGCATTTCCTCTGCAGAAAGTGCAAACACTATTCAACTTTACTTTGAATTTCCCCATTTATCAAATACAATCAAATTTCAACGAGCTGACAAGTCAGCTAAAGTCTGGATTACATCTGGCATCCTTTGAGGTCTGTCAATTCTTCTTTCTTTTCTTAATGTTTCTATCATTGAATTTGATTGGGTTTCCTGGTTGGTTGCAGAACTTGTATGTCATCTTATCCAATTCTGAAGGTTCAACAGTAGATGCTCCGACTATTGTTCAGTCATCTGTTCTACTAGCAATTGGGATTACTCCATCAAAAGAGAGGCTAAAGCAGCTGGCACAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACTGAATTTGGAAGGGTTAAGCAGGTCCGACTTTCATCCATCTTGCAGCACTCCCTTAATGGCAGTGATGGTCATCCACCTTCTCCTGCTCCGCAGCCTCATTCACCACACCATCACCACCACCACCATCGACATCATCATCATCATCACCACCACCACCACCACCATGATGCCCATCTAACTCCTGCAACTTCTCCTATACCTTCACCTGCACCTGCACCTGGGGAGGGTGTTATTCCACCTAAGGCTGGTTCTCCTGCTGCTACAAAAACTGTGCCTGCACCAGGGAAAAGCCCTCAAGCTCAGCCTCCTAATTGTCCATTTCAGCATAGGAAAAGGTCTAGCCATAATGCTCGGAAGCGTACTGCTCCTCTAACACCTGCTGTTGCTCCTACTATGGATCCGCATCATCCTGTTCCTGTTGTGTCACCAAAACCACAGGTTGAACCCCCGGCACATGTCTCTCATTCAGTACCTGCTTTGAGTCCTTTACCAAATGTAGCCTTTGCTCATGCTGAGCCCCCTCCTAAGAGTGAGCCAGCTCCAGAACATTCTCACACACATTCTCATGGGCAATCATCATCTTCATGTGAGTATGCTTAA 1557 0.456 MGKAEEEQQPLPRGGSSADPPQNADAVCRCRCSRIRKLVGVRCILVLLLSVAVFLSALFWLPPFLRLADQKNLHDGSRYKGHDIVASFIVNKSVSLLEDNILQLTDEIFDEIEAPSKIQVVTLSLDPLPGPNKTKVVFAVDPDGEYSSAAISLIRASFTSLVLHQSILRLTSSLFGDPFFFEVLKFKGGITIIPQQNAFPLQKVQTLFNFTLNFPIYQIQSNFNELTSQLKSGLHLASFEVCQFFFLFLMFLSLNLIGFPGWLQNLYVILSNSEGSTVDAPTIVQSSVLLAIGITPSKERLKQLAQTIMGPHNLGLNNTEFGRVKQVRLSSILQHSLNGSDGHPPSPAPQPHSPHHHHHHHRHHHHHHHHHHHHDAHLTPATSPIPSPAPAPGEGVIPPKAGSPAATKTVPAPGKSPQAQPPNCPFQHRKRSSHNARKRTAPLTPAVAPTMDPHHPVPVVSPKPQVEPPAHVSHSVPALSPLPNVAFAHAEPPPKSEPAPEHSHTHSHGQSSSSCEYA. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03212 518 MobiDBLite consensus disorder prediction 449 465 - -
Seca1g03212 518 MobiDBLite consensus disorder prediction 383 397 - -
Seca1g03212 518 PANTHER F20B24.21 1 240 - -
Seca1g03212 518 MobiDBLite consensus disorder prediction 352 376 - -
Seca1g03212 518 MobiDBLite consensus disorder prediction 335 518 - -
Seca1g03212 518 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03212 Seca-Chr1 90214507 90218922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03212 1 333 C3H Transcription Factor Family AT3G10810 50.592 5.38e-87 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03212 - - gmx:100792490 602.053