Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03179 ATGGAGAAAATCATACTGGGAAAGCAAGAATGGACCTTGATTGTGCCTACCCCTTTTGTTTTCCTAGTTCCTTTTATCAAGGCATCAGTGCCAGATGAGGCATTGGAAAACATGGCACATTTCCTTTCTGAATTGGGGATGATGCATTATGCCACCTTGATGTTTTGTCCATCAATGGTTGCTGCCTCAGCAGTCTATGTTGCTAGATGCACTCTGAATAAGAGCCCTGCTAGATGCACTTAA 243 0.4321 MEKIILGKQEWTLIVPTPFVFLVPFIKASVPDEALENMAHFLSELGMMHYATLMFCPSMVAASAVYVARCTLNKSPARCT. 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03179 80 PANTHER CYCLINS 1 73 IPR039361 -
Seca1g03179 80 SUPERFAMILY Cyclin-like 15 76 IPR036915 -
Seca1g03179 80 Gene3D - 4 80 - -
Seca1g03179 80 Pfam Cyclin, C-terminal domain 16 76 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03179 Seca-Chr1 88790501 88790836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03179 1 76 Core Cell Cycle Gene Families AT3G11520 69.737 1.63e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03179 K21777 - gmx:547919 130.954