Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03142 ATGCTGCTAGTGCTACCTCAGTCATTTACTATGATTGCAATTATGACCATTGTTCTTGCACAAACACTACTTGTTGGGGTGAATTCCCTTCCTGAAGCTGATAAAATAAGCAGATTACCAGGGCAACCACATGTCAAATTTCAACAATATTCTGGTTACATTATGGTGGATGATAACCAGCAGAGAGCTTTGTTTTATTACTTTGTTGAAGCAGAACATGACCCTGCTTCCAAACCATTAGTCCTCTGGTTAAATGGAGGGCCTGGTTGTTCATCTATTGGAGTTGGAGCTTTTGCTGAGCATGGCCCTTTCATACCTGGTGATGACAATGTTCTTCTCAAAAATCATTATAGTTGGAACAAAGCTGCAAATATGCTATATTTGGAATCACCAGCTGGTGTTGGATTCTCCTACTCTGCCAATAAATCCTTCTATGCCTTAGTGACAGATGAAATTACAGCAAGGGATAATCTTGTTTTCCTACAACGCTGGTTCACTAAATTCCCAGAGTACTCAAATAATGACTTCTTTATAACAGGGGAGAGCTATGCAGGTCACTATGTTCCACAACTTGCACAACTTATTGTTGAAACAAAAACAAAGTTTAATCTCAAGGGCATAGCAATAGGGAATCCCCTTTTGGACATAAATACTGATTTTAACTCCAGAGCTGAGTTCCTTTGGTCCCATGGACTGATATCAGATCCTGTTTACAACATCCTCACTAAAGTTTGCAACTTTTCCACAATTTGGAGACAGAATCGAAAAGGGAATCTTAGTGGAGTTTGTGCAAGAGTTGATAATCTTGTGTCTACTGAGGTTAGCGATTATATAGATGTTTATGATGTCACACTTGATGTCTGTTTGTCATCAACAAAACAACAGGCTTATGTGCTGAATCAACTGCATGCACAGTTATTATTATTTTTTCTTCATTTTGATTTGTGTGATTTGGTACAGCAAGAGACAGAGAAGATAGATGTTTGTGTGGAAGATAAAACAGTGACATACTTAAACAGGAAAGAAGTGCAGGAAGCTCTCCATGCTAAGCTTGTTGGAGTTACCAGATGGTCAACTTGTGGTGGCAAAGTTCTTCATTATGATCGTCAGAATCTAGAGATACCAACAATTCCTATTCTACGGTCACTTATTAAGTTTGGCATTCGAGTTCTAGTTTATAGTGGAGATCAAGATTCAGTTATCCCATTACTAGGGTCAAGATCTTTAGTGAATAAACTAGCAATGGAACTTCAATTGAATACAACAGTGACCTATAGAGCATGGTTTGAGAAAAGACAGGTAGCAGGATGGACACAGGTATATGGTGACATCTTATCATATGCCACCATAAGGGGAGCATCTCATGACGCTCCCCATACTCAACCAGAGAGATCACTTTTGTTATTTAAAGAATTTTTGAAAGGAAAACCTTTACCAAGTATATCTAAAATATGA 1455 0.3828 MLLVLPQSFTMIAIMTIVLAQTLLVGVNSLPEADKISRLPGQPHVKFQQYSGYIMVDDNQQRALFYYFVEAEHDPASKPLVLWLNGGPGCSSIGVGAFAEHGPFIPGDDNVLLKNHYSWNKAANMLYLESPAGVGFSYSANKSFYALVTDEITARDNLVFLQRWFTKFPEYSNNDFFITGESYAGHYVPQLAQLIVETKTKFNLKGIAIGNPLLDINTDFNSRAEFLWSHGLISDPVYNILTKVCNFSTIWRQNRKGNLSGVCARVDNLVSTEVSDYIDVYDVTLDVCLSSTKQQAYVLNQLHAQLLLFFLHFDLCDLVQQETEKIDVCVEDKTVTYLNRKEVQEALHAKLVGVTRWSTCGGKVLHYDRQNLEIPTIPILRSLIKFGIRVLVYSGDQDSVIPLLGSRSLVNKLAMELQLNTTVTYRAWFEKRQVAGWTQVYGDILSYATIRGASHDAPHTQPERSLLLFKEFLKGKPLPSISKI. 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03142 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 462 IPR001563 GO:0004185|GO:0006508
Seca1g03142 484 FunFam Carboxypeptidase 29 479 - -
Seca1g03142 484 Gene3D alpha/beta hydrolase 31 290 IPR029058 -
Seca1g03142 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Seca1g03142 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Seca1g03142 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Seca1g03142 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Seca1g03142 484 ProSitePatterns Serine carboxypeptidases, histidine active site. 445 462 IPR033124 GO:0004185
Seca1g03142 484 Gene3D - 376 475 - -
Seca1g03142 484 Gene3D - 329 365 - -
Seca1g03142 484 FunFam Carboxypeptidase 376 475 - -
Seca1g03142 484 SUPERFAMILY alpha/beta-Hydrolases 38 479 IPR029058 -
Seca1g03142 484 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Seca1g03142 484 Pfam Serine carboxypeptidase 41 475 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03142 Seca-Chr1 86817772 86824921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03142 337 478 Calmodulin-binding Proteins AT2G22960 30.986 3.45e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03142 K16297 - gmx:100799900 727.628