Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03127 ATGAACTGTCATAGAAGGCGACATGGAATGCTAGCTCTCTATGCATATATCGACAAGTGGGGTTGGAGGTGCCGTGCGAAATTGGCTGTGCGTGGCTCTTCAACCAACCCTCTTATTGGGCTCTATGAGGAGGGTACTCATAACGTAATTGACATTCCAGAGTGCAAAGGTTCAGAGCTTGATTACATTACTAAGATCTCTGTTTCCTCCGTGTGCAATTCGAGTCAGACTCCTCTCAATTGGTCTCGGCGTGTAATAAAGTCCTTATTGGCCGGTCATATTTTGCTGAAGAACAAAATCCAGTTGTTTTTTGGGTTGAAAAAGCTTGATGAGTACCTTCTCTCCCGCAATTATATCACTGGGTACCAAGCTTCAAAGGATGATGTTACCGTATATGTTTAG 402 0.4378 MNCHRRRHGMLALYAYIDKWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECKGSELDYITKISVSSVCNSSQTPLNWSRRVIKSLLAGHILLKNKIQLFFGLKKLDEYLLSRNYITGYQASKDDVTVYV. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03127 133 PANTHER BNAA06G32370D PROTEIN 18 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03127 Seca-Chr1 86481408 86486984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03127 105 132 Eukaryotic Initiation Factors Gene Family AT2G18110 82.143 2.38e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03127 - - lja:Lj0g3v0055679.1 85.1149