Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03097 ATGGCATTTGATGTAGAATACGCACGATGGTTAGAAGAACATAATAGGCATACCAATGAGCTGAGGGCCGCTATAAATTCTCATGCTGGAGATATTGAACTTCGAACCATTGTTGACAATTTCATGACACAATTTGAAGATATATTCAGGCTGAAAGGTATTGCAGCAAAAGCTGATGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCTGAACTTCTCAAGTTCATTCCCTGTGTTGCCCATCTAAAAACAGTATTAACACTGCTGCAGCTTCTTGTAAGTCAATTGGAGCCTTTAACTGAGCAACAATTGATGGGAATCTACAACTTGCAACAGTCATCCCAACAAGCTGAAGATGCTCTCTCCCAAGGAATGGATGCATTGCAGCAATCACTATCTGAGACACTGGCTAATGGTTCACCCAGCCCATCAGGCTCTTCAGGAAATGTAGCAAACTATATGGGGCAAATGGCTATGGCCATGGGAAAACTTGGTACCCTCGAAGGGTTTCTCCGCCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTTAGGATATTAACAACCAGGCAATCAGCTCGAGCACTTCTCGCCATAAGCGATTACTTCTCCCGCCTGCGAGCCCTGAGTTCTCTATGGCTTGCCCGGCCAAGGGAATGA 711 0.4501 MAFDVEYARWLEEHNRHTNELRAAINSHAGDIELRTIVDNFMTQFEDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKFIPCVAHLKTVLTLLQLLVSQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPSPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03097 236 ProSiteProfiles DOG1 domain profile. 1 233 IPR025422 GO:0006351|GO:0043565
Seca1g03097 236 PANTHER TRANSCRIPTION FACTOR TGA9 1 236 - -
Seca1g03097 236 Pfam Seed dormancy control 17 91 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03097 Seca-Chr1 85920175 85922582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03097 1 236 bZIP Transcription Factor Family AT5G06950 71.610 7.15e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03097 K14431 - gmx:778136 389.423