Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03036 ATGGACATTCGTTTTAGCTATAGTGTTAGCTCTGATGGAAGTGAAAGTGATGAGCCCAGTGATGTTGCTGATGAAGGTGTGTCACATGATGAACTGAAAAATATAGTAAACGTAACAGCGGATGAAATTTCTAATATGGAGTTTTCTAGTGAAGAAAATGCATACAAATTTTATTTTGCTTATGCAAAGTTTTATGGCTTCGTTATTAAGAGAGATGATTTAGGTCGCGATAAGAACAAGAGAATGGTATGGAGTCCGGTTTTATGCAACAGGGCCGGATTTAGGGGCCCAAAGCACCTGATAGGAAAAGAGATCACAAACCTCTCAATCGTACCAACTGCAATGCTAGGTTGCGGGTTCGCCTTGACTATAGTACATCAAAATGCAAAGTGGTGGCATTTGATCTGGTTCATAACCATGATTTAA 426 0.392 MDIRFSYSVSSDGSESDEPSDVADEGVSHDELKNIVNVTADEISNMEFSSEENAYKFYFAYAKFYGFVIKRDDLGRDKNKRMVWSPVLCNRAGFRGPKHLIGKEITNLSIVPTAMLGCGFALTIVHQNAKWWHLIWFITMI. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03036 141 MobiDBLite consensus disorder prediction 1 26 - -
Seca1g03036 141 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03036 Seca-Chr1 83125565 83125990 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03036 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03036 - K14833 tpra:123889926 60.8474