Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02981 ATGGCTGAATCATTTGCCTTTGATGTTGCTCATTCACTGTTGGGGAAGCTTACTTCTTATGCCTATGAAGAAGCTTCTCGAGCCTATGGTGTCTATGATGATCTGCAACGGTTCAAAAACACTTTGTCAATTGTCAAAGGTGTGCTATTGGATGCTGGAGAGAAGAAGGACCAGAAGCATGGCTTGCGTGAATGGTTGAGGCAGATTCAAAATATCTGCTACGATGCTGAAGATGTCTTGGATGGATTTGAGTTCCAAAACAAGCGAAACCAAGTTGTCAAAGCTTCTGGCAGCACTAGGATGAAGGTAGGCCACTTCTTTTCTTCACATAATTCTCTTGTTTTCCGTACAATGATGGCTCATCAAATCAAAGATGTTACGGATAGATTGGATAAGGTAGTAGCTGATGGAAACAGGTTTGGTCTTGAGAGAAGAATTGATGTTGATCCTAGACTTGGTCAGAGAGATATGACTTTTTCCCACGTTGATGCTTCAAATGTGATAGGAAGGGAGAATGACAAGGAAGAAATTGTCCAGCTATTGATGCAACCTCACCCTCATGGGGATGGTGATGGTGATAAAAGTCTTTGTGTTATTCCCATAGTGGGAATTGGAGGCTTGGGGAAGACCACACTTGCAAAGCTGGTGTTCAACGATAAGAGGATGGATCAACTTTTCCAACTGAAAATTTGGGTGTGTGTCTCTGATGATTTTGACATTAGGGAGATAGTTATTAAGATCATCAACTCTGTTTCTGCTTCTACTTCAGCTCCAAACATCGCTCATGCTCACCAAGAAAACATTAACCATTTAAATATGGAGCAGCTAGTAAGTCATCTTAGATATAAACTTTCTCATCAAAAGTTTTTACTTGTCTTAGATGATATATGGAATCATGATCGTGCCAAATGGATTGGGTTGAAAGATTTGATAAAAGACGGTGCGATAGGAAGTAAAATCTTAGTCACAACACGTAACAAGTCAATTGCTTCAATGATGGGGACGGTTGATCCGTATGTTTTGATAGGTCTTTCTCCGGAGAATTGTTTTTCTCTGTTTGTCAAATGGGCATTCAAGGATGGTGAAGATAAAAACTATCCAAATCTAGTGGAGATTGGAAAAGAAATTGTCAAAAAATGTCATGGAGTTCCACTAGCTGTGAGAACCTTAGGAAGTTCCCTATTCTCAAAATTTGATTTAGAGAAATGGGAATTTATAAGAGACTCTGAACTATGGAATTTAGAACAAAAGGAAGATGGTATTCTCACTGCGCTGAAGCTAAGTTATGATCAGATGCCATCCCATTTGAGGCATTGTTTTACTTACTTTTCCCTTTTTCCCAAAGATTATGACTTTGATGGTAAGTTAATGACTAAGCTTTGGCTGGGCCATGGATTACTTCAATCCCCAGATGGAAGTAAAAAGAAAAATGATATTGTAAGAGAATATATAGATGAGTTATATTTAAGATCCTTTATTCAAGATTTTGAAGTCTTTGGCCACACTAACTACTTTTCCAAAGTGCATGATTTGGTGCATGATCTTGCAATGTATGTTGCGAAAGAGGAGTTTGTAGTGGTAAACTCCCATACTCAGAATATACCTGAGCAAGTAAGGCATTTATCAATTTTGGAAACTGATTCACTTGGCCATGCTCTGTTCCCCAATTCCAGAAGTGTGAGAACTATCCTATTTCCCATTGATGGAGTGGGTCTTGACAATGAAACTATTTTGGATTCATGGCTATCAAGATACAGATACTTGCGGTATTTAGATTTAAGTGATTCTTCATTTGAGACTCTACCTAATTCAATTGCTGAATTAGAGCATCTACGATCTCTTAGTCTTGCTCTTAACCACAAAACCAAAAGACTTCCACATTCTATATGCAAGCTCCATAATTTGCAAATTTTGTCACTCGAAGGATGCATAGAGCTTGAAACATTGCCTAAAGGATTAGGGAAGCTGATTAGCCTTCGAGAATTGTATATAACCACAAAACAATCAGTTCTGCCACATAATGAATTTGCAAGCTTGACCCATCTTCAAGTGTTGGGTTTTTATCGTTGTGACAATTTGAAGATTTTGTTCAACGGGGCACAACTCGATTCCCTTGAAGATTTGTATGTTGATTCATGCAGGAGCCTAGAGTCCTTACCACTTTATATTCTCCCTCAATTACAGACTTTGTTGGTTATCAACTGTAAGAGGTTAAATCTGTCATTGAAGGCTGAAAGCCCAATCCAACAATCAATGAACCATGAAAACACAATCCAAAGATTGAGGTTGGAAATTTTGCAACTTGTGGATTTTCCAGAGCTTCAAATGTTGCCTCAATGGATTGAAGGAGCTACAGGCACTTTACAGAGCTTGATAATTTATAATTTTCCTAATCTGAAGATGCTTCCAGAGTGTCTCACAACAATGACTCATCTTAAGATACTTCGTATTGGTAACTGTCCTCAACTGTTGAGTCTTCCAAGTAACATGCATCACCTCACTGCTCATCTTGAAGAATTGTTGATATTTGGTTGTCCTGAATTGTGCCGAAAATGTCAGCCGCAATCTGGTGAGTATTGGCCCATCATTGCTCACATAAAAAAAATTGACATTGAAGAACCAAGAGAACAGGAGGAGAAATGA 2643 0.3852 MAESFAFDVAHSLLGKLTSYAYEEASRAYGVYDDLQRFKNTLSIVKGVLLDAGEKKDQKHGLREWLRQIQNICYDAEDVLDGFEFQNKRNQVVKASGSTRMKVGHFFSSHNSLVFRTMMAHQIKDVTDRLDKVVADGNRFGLERRIDVDPRLGQRDMTFSHVDASNVIGRENDKEEIVQLLMQPHPHGDGDGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRMDQLFQLKIWVCVSDDFDIREIVIKIINSVSASTSAPNIAHAHQENINHLNMEQLVSHLRYKLSHQKFLLVLDDIWNHDRAKWIGLKDLIKDGAIGSKILVTTRNKSIASMMGTVDPYVLIGLSPENCFSLFVKWAFKDGEDKNYPNLVEIGKEIVKKCHGVPLAVRTLGSSLFSKFDLEKWEFIRDSELWNLEQKEDGILTALKLSYDQMPSHLRHCFTYFSLFPKDYDFDGKLMTKLWLGHGLLQSPDGSKKKNDIVREYIDELYLRSFIQDFEVFGHTNYFSKVHDLVHDLAMYVAKEEFVVVNSHTQNIPEQVRHLSILETDSLGHALFPNSRSVRTILFPIDGVGLDNETILDSWLSRYRYLRYLDLSDSSFETLPNSIAELEHLRSLSLALNHKTKRLPHSICKLHNLQILSLEGCIELETLPKGLGKLISLRELYITTKQSVLPHNEFASLTHLQVLGFYRCDNLKILFNGAQLDSLEDLYVDSCRSLESLPLYILPQLQTLLVINCKRLNLSLKAESPIQQSMNHENTIQRLRLEILQLVDFPELQMLPQWIEGATGTLQSLIIYNFPNLKMLPECLTTMTHLKILRIGNCPQLLSLPSNMHHLTAHLEELLIFGCPELCRKCQPQSGEYWPIIAHIKKIDIEEPREQEEK. 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02981 880 Gene3D - 10 124 - -
Seca1g02981 880 Gene3D - 428 515 IPR036388 -
Seca1g02981 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 442 IPR027417 -
Seca1g02981 880 SUPERFAMILY L domain-like 507 861 - -
Seca1g02981 880 CDD RX-CC_like 6 133 IPR038005 -
Seca1g02981 880 Gene3D - 343 427 IPR042197 -
Seca1g02981 880 PRINTS Disease resistance protein signature 380 394 - -
Seca1g02981 880 PRINTS Disease resistance protein signature 630 646 - -
Seca1g02981 880 PRINTS Disease resistance protein signature 283 297 - -
Seca1g02981 880 PRINTS Disease resistance protein signature 198 213 - -
Seca1g02981 880 Pfam NB-ARC domain 192 430 IPR002182 GO:0043531
Seca1g02981 880 Pfam Rx N-terminal domain 11 98 IPR041118 -
Seca1g02981 880 Gene3D - 156 337 IPR027417 -
Seca1g02981 880 Gene3D Ribonuclease Inhibitor 516 870 IPR032675 -
Seca1g02981 880 PANTHER DISEASE RESISTANCE PROTEIN RP 63 819 IPR044974 GO:0006952
Seca1g02981 880 FunFam Probable disease resistance protein At1g61300 153 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02981 Seca-Chr1 81817859 81820501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02981 199 848 WRKY Transcription Factor Family AT5G45050 21.848 2.19e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02981 - - gmx:100795479 1212.59