Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02976 ATGGAGGATTGCTTGAGAAGAGGGGTTCATGATTTTAACATGGCTTCAAGAAAAGCTGAAGAAGCTGCTTGGAGACGCTATGAAGCTACTCAGTGGCTAGAAAGCCAAGTGGGTCCTCTTGGCATATCCAACCAACCCACAGAGAGAGAACTTATTTCTTGCTTAAGAAATGGTCTAATTCTTTGCAACGCCATTAACAAGATTCATCCAGGAGCAGTGCCAAAGGTTGTGGATAATCAAGTAGCTTCACAAGCACTTACCTGGGATTCCCAGCCTTTGCCAGCCTATCAGTATTTTGAAAATGTCCGCAACTTTCTGGTTGCAGCGGAAGAATTAAAGCTTCCAGCTTTCGAAGCTTCTGATCTTGAAAGGGATAGTGTAGAAATGGGATCAGCAGCAAAAGTTGTTGATTGCATTCTATCACTTAAATTGTTTCAAGAGATGAAGCTTATGAACTATCAGAATGGATCCAACAAGCACATAAAATCTCCTTTACTTATGAACTCAAACAGTAGAATGCATTCAAGAGCCACAGCTGCATTCCCCTCTGATGCATGTAGGCACTTGGATCTGTCTACCACATTGGACAAAACACCTGTTGAGAGTAATTTCCAGAGACGAGAAGAACTTGTGGAATCACTTGTCAAGCTACTGGTTGACCGGATGTTTGACGCTAAAGAAAATATTGGTGGAAACATTATTGCTTCTCTTCATAATGAAGACCTGGATCCAATAAAGCTATTTAATCAGATCATGACAAGTTGTGGGGAACAACCACCTATGAAGTTCCCTGAGCTGCCATTGCTACTCAAGAATGTTATAAAAGAAAGGATTAGCTTACAACCTCATTCCACTTCCACACCCACAGAATCAGATGCTTTGTCTGCTCCTGAAAGTTCCCAGTGTTACAGAGCTTGCCCCGGAAAGTGCACTTGCAATCAAAAGAATCTCTTAGATATGCAGGAAAAAGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAAGAGATGCAGTCACAGTTTCAGAGATTTTTTGATGATATTGGAAGTCAAATACAGGACATGTCAACCAAAGCCCTTGGGTATCACAGAGTGGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCTCATTCCAGGCTGAATCCAAGAATGTTATTGATTTCATTGGGGAAGACGGTTCTCTTTTCATTTTAGATCCATCAAAACCACTAAAAGATGGAAGGAAACTTTTTCAGTTTAATAGGGTTTTTGGTTCAACAGCTGGCCAAGATGAGGTTTTTAAGGACACTCAACCATTAATTAGATCCGTGATGGATGGGTACAACGTTTGTATTTTTGCTTATGGACAAACTGGATCTGGGAAGACTTACACTATGAGCGGTCCTTCGGGTGGAACATCTAAGGATGTGGGGATCAATTATTTGGCTCTTAATGATCTGTTTCAAATGTCCAAAGAAAGAAAGGACATTATAACATATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTAAGAGACCTACTTGCTGAGGACAAAACAGACAATAAATTAGAGATCCGGAGCTGCAATGATGATGGGTTGGGCCTTCCTGATGCTAATTTGCGTTCAGTAAAGTCCACAACTGATGTTATAACCCTCATGAAACTTGGTGAGGTTAATCGCGCTGTCAGTTCCACTGCGATCAACCACAGGAGTAGTCGTTCACACAGTGTACTCACTGTGCATGTTCATGGCAAAGATACATCTGGGAGCTCCATTCGTAGTTGCCTGCACTTAGTAGACCTTGCTGGAAGTGAAAGAGTAGACAAGTCTGAAGTTACAGGAGAAAGACTAAAGGAAGCACAATTTATTAACAAGTCTCTCTCCTGTTTGGGAGATGTTATCACTGCCCTGGCTCAGAAGAATTCTCACATTCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCTTTAGGTGGACATGCTAAAACATTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCCTTTGGTGAAACAGTGAGTACTCTAAAATTTGCTCAGCGGGTTTCCACTGTGGAACTGGGGGCAGCCCGTATGAACAAAGAAAGCAGTGAGGTTAGGCAACTTAAAGAACAGGTTGAGAACCTTAAGCTTGCATTGGCAAATAAGGAAAATCTAAGAGCAGTGTTCAATAGAACTAAAGAACCTCATACTCCATCAGAGAGGCCAATGTTGGTGTCTGAGAAAACTCCATTGCGCCCTCGAAGACTTAGCATTGAGAATTGCAGCGCCGTAAAGACTGATAAACCTGCAAATCCTGAGGACATAAGTGGAATCAAATCACCTTCCTTGTTACGTCGTTCAAGGAGATTAAGCTTGGAAGGTTCAAGAACTATCAAGAAAGACAGTAGTCTACAACCAAAAGTAGCAACTGATCTAAGCAAAACTTTACAGTATGAGCCACTGTCTCAGCAGAAACATCGACCACAGCAAGATCCAGAAGCAGTGTCAAAGCTAAATGGCCAAATCAGCAATGGAAATTCCAGTGTCAAAGCTCCTCGAAGCCCTACAAACATTTCCTATAACAAGAGGTTGATAAAAGTAGATGGAGGGATCCAAATTCATCCACTTAAACTACCTCAGACACCTGAACCACCAATGCTAGATGCAAATAATGCACACAAAACTGTGCCAAGTGAGCTTGCATCTTGCACTGATTCACAGACAACAAAGGTGACAAGTAGCACAAATGGAAAAGGATCCCATATAAGAAGATCCCTGAGAACAATTGGGAAACTGATTAATGGCCCTGATAAGAGGAGCCAACAAAATGTGGTTGAAGTCAAGTCACCAATTAAGGGCACTAGCCATACCAATCAAGTAAAGTCACCACTGACAGCTGGTGAGAAGACAAGAAGGAGGCAATCTCTAACAGGGATTCAAGCATCAGGGCCAAACAACTCACGCAGGTCTTCACTTGGAGTGAAGCCAGTAGCATATGACAAGGACAGAAATGCTAGAACGCCTCCTCCTGTGCAATCTGACACCAAGACTTCAAAACGGTGGATATAG 3129 0.4183 MEDCLRRGVHDFNMASRKAEEAAWRRYEATQWLESQVGPLGISNQPTERELISCLRNGLILCNAINKIHPGAVPKVVDNQVASQALTWDSQPLPAYQYFENVRNFLVAAEELKLPAFEASDLERDSVEMGSAAKVVDCILSLKLFQEMKLMNYQNGSNKHIKSPLLMNSNSRMHSRATAAFPSDACRHLDLSTTLDKTPVESNFQRREELVESLVKLLVDRMFDAKENIGGNIIASLHNEDLDPIKLFNQIMTSCGEQPPMKFPELPLLLKNVIKERISLQPHSTSTPTESDALSAPESSQCYRACPGKCTCNQKNLLDMQEKELLDLKALKLKIKNEFEEMQSQFQRFFDDIGSQIQDMSTKALGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFQAESKNVIDFIGEDGSLFILDPSKPLKDGRKLFQFNRVFGSTAGQDEVFKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGTSKDVGINYLALNDLFQMSKERKDIITYDIYVQMVEIYNEQVRDLLAEDKTDNKLEIRSCNDDGLGLPDANLRSVKSTTDVITLMKLGEVNRAVSSTAINHRSSRSHSVLTVHVHGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARMNKESSEVRQLKEQVENLKLALANKENLRAVFNRTKEPHTPSERPMLVSEKTPLRPRRLSIENCSAVKTDKPANPEDISGIKSPSLLRRSRRLSLEGSRTIKKDSSLQPKVATDLSKTLQYEPLSQQKHRPQQDPEAVSKLNGQISNGNSSVKAPRSPTNISYNKRLIKVDGGIQIHPLKLPQTPEPPMLDANNAHKTVPSELASCTDSQTTKVTSSTNGKGSHIRRSLRTIGKLINGPDKRSQQNVVEVKSPIKGTSHTNQVKSPLTAGEKTRRRQSLTGIQASGPNNSRRSSLGVKPVAYDKDRNARTPPPVQSDTKTSKRWI. 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02976 1042 MobiDBLite consensus disorder prediction 968 1042 - -
Seca1g02976 1042 FunFam Kinesin-like protein KIN-14A 329 713 - -
Seca1g02976 1042 Gene3D - 15 148 IPR036872 -
Seca1g02976 1042 ProSiteProfiles Kinesin motor domain profile. 387 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g02976 1042 Pfam Calponin homology (CH) domain 25 144 IPR001715 GO:0005515
Seca1g02976 1042 SUPERFAMILY Calponin-homology domain, CH-domain 22 154 IPR036872 -
Seca1g02976 1042 Gene3D Kinesin motor domain 329 713 IPR036961 -
Seca1g02976 1042 SMART kinesin_4 385 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g02976 1042 Coils Coil 318 345 - -
Seca1g02976 1042 PRINTS Kinesin heavy chain signature 582 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g02976 1042 PRINTS Kinesin heavy chain signature 612 630 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g02976 1042 PRINTS Kinesin heavy chain signature 460 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g02976 1042 PRINTS Kinesin heavy chain signature 661 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g02976 1042 MobiDBLite consensus disorder prediction 920 943 - -
Seca1g02976 1042 CDD CH_AtKIN14-like 25 144 - -
Seca1g02976 1042 Pfam Kinesin motor domain 393 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g02976 1042 FunFam Kinesin-like protein KIN-14L 11 174 - -
Seca1g02976 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 745 IPR027417 -
Seca1g02976 1042 MobiDBLite consensus disorder prediction 1028 1042 - -
Seca1g02976 1042 MobiDBLite consensus disorder prediction 838 876 - -
Seca1g02976 1042 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Seca1g02976 1042 MobiDBLite consensus disorder prediction 776 802 - -
Seca1g02976 1042 MobiDBLite consensus disorder prediction 920 942 - -
Seca1g02976 1042 Coils Coil 715 748 - -
Seca1g02976 1042 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 958 IPR027640 GO:0003777|GO:0007018
Seca1g02976 1042 SMART ch_5 25 145 IPR001715 GO:0005515
Seca1g02976 1042 MobiDBLite consensus disorder prediction 968 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02976 Seca-Chr1 81728445 81736948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02976 375 711 Calmodulin-binding Proteins AT5G65930 43.605 3.16e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02976 K10406 - gmx:100786642 1567.36