Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02905 ATGCTTGAACAGGAGTGTCTCCTTAGATCAGCATTGTTACTATGTGTTTTTGTTGGCTTCTTGCTACATCCTGTTGTGACAACTACAATACCTTTGGGTTCCAAACTTACTGTGGTTGACAATAATTGTTGGGTTTCCTCCAATGGAGATTTTGCATTTGGGTTCTTTAACATTTCAGATGAACCTAACCAGTTTAGTGCTGGCATTCATTTCAATTCAAAGTCTATACCATATAGCCAACAAACTGTGGTTTGGATTGCTGGTGCTCATGTCACAGTAAGCAACAGTTCCTATTTCCAACTCACTCAAGAAGGGGAACTGGTCTTGTTTGATTCCTTTCAAGGAGTCACTGCATGGACCAGTGGAACAGGCAACCAATCTGTTGTTTCAGCTGTTCTTCAAGATAATGGCAATCTTGTTCTTATAGACTCAAAGCAAAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTCTCCCAGGCCAGAGTTTTTCTGTTTATCAGATACTTCGTGCTTCAAGCAAGAATCCAATGTCTAGTTACTACAGTCTTTACATGAATGCTTCTGGTCAGTTGGAGCTTCGCTGGGAGAGTAATATTATATACTGGACAAGTGAAAGCCCTTCTAATACTTCAAATCTCACTGCATTCCTTACAGCTGGTGGAGCTTTGCAACTTAGAGACCAGAGTTTGAAAGCTGTTTGGAGTGTGTTTGGAGAAGACCACAATGATTCAGTGAATTACCGATTTCTCAGGCTAGATTTGGATGGCAATCTCCGGATATACTCATGGATTGAAACCTCACAATCATGGAGATCAGTCTGGCAAGCTGTTGAAAATCAATGCAAAGTTTTTGCAACTTGTGGCCAACGCGGTGTGTGTGTCTTCACTGATTCAGGTTCTGCTGATTGCAGTTGCCCTTTTGAGGTAACTGAGACTAACAAATGTTTGGTTCCATATGAAGAGGAGTGTAAATCTGGCTCCAATATGATCACATATAAGAACACATATCTATATGGAATTTACCCTCCTGATGATTCAGTTATCATAAGTAGTTTGCAGCAATGTGAGCAGTTATGCCAGAATGATCCACAGTGTACAGTTGCAACCTTTTCCAACAATGGTAGTCCACAATGCTCCATAAAGAAAACTAAGTATATTACTGGCTATGCAGATCCATCTCTTAGCACAACATCATTTGTTAAGAGGTGCTCAGGTCCATTTGCTGTGAATCCTAGTCTCATGAAGCCCCTTCCACCAAAACCGCCTCCAAGGATTTGTGTTTCTTGTGTAATGGGAGCAACCTCAGGAACATTTCTCATCTTTGCTATGCTCCAGCTGGGAATTGTTTTCTTCATCTATAGAAGAAAAAACTCTACCATGAGAAAAGTCACTTTAGCTTTCACATGCTCAAATTCAAAGGGCTTAACTGTGTTATCCTTCTCGGAAATCAAGAGCATCACTGGGGATCTCAAGAATCAAATTGGGCCAAACATGTTCAAGGGTGTGCTACCAAACAATCACCTGATTGCAGTAAAAAACCTGAATGCATCCATAGAGGAAAGGAAGTTCCGGAGTGCTGTCATAAAGATAGGGAGCATCCACCACAAGAACCTTGTGAAGCTGGAGGGCTATTGCTGTGAGTTTAATCATAGATTTTTGGTGTATGAATATGCCAAAAATGGTTCACTTGATAAGTATTTAGATGATTGTACTCTTTGCAAGAGGCTAACTTTTAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCAAAAGCCATCTGTTATTTACACTCAGGGTGTAGGGAATTTGTGAGCCATGGAAATTTGAAATGTGAGAATGTCATATTGGATGAAAATTCAGTGGCCAAGGTGACTGAATATGGTTTTGCAATAGTGAATGGTGAGGCCACATATTGTGGCTTTTCAGCTGAAAAGGATGTAAGGGATTTTGGCAAGTTAGTATTAACCTTGTTGACTGGGTGTAGAGATCATGAAGAACTTTGTGAGTGGACATATAAAGAATGGGCAGAAGGTAGAGCAGGTAATGTGGTTGATAAAAGAATTGATGGTGATGCCAATTCAGAGGAACTTGAACGTGCATTAAGAATTGCATTCTGGTGTCTTCAAATGGATGAACGTAGAAGACCTTCTATGGAGGAGGTAGTGAGAGTACTAGAGGGTACATTGAATGTTGATCCCCCACCACCTCCATTTGCCTTCAATAGGCCATTACAGGAAGATGATGATTCACAAGAAATAGGTTCAGAATAA 2277 0.404 MLEQECLLRSALLLCVFVGFLLHPVVTTTIPLGSKLTVVDNNCWVSSNGDFAFGFFNISDEPNQFSAGIHFNSKSIPYSQQTVVWIAGAHVTVSNSSYFQLTQEGELVLFDSFQGVTAWTSGTGNQSVVSAVLQDNGNLVLIDSKQNIIWQSFDTPSDTLLPGQSFSVYQILRASSKNPMSSYYSLYMNASGQLELRWESNIIYWTSESPSNTSNLTAFLTAGGALQLRDQSLKAVWSVFGEDHNDSVNYRFLRLDLDGNLRIYSWIETSQSWRSVWQAVENQCKVFATCGQRGVCVFTDSGSADCSCPFEVTETNKCLVPYEEECKSGSNMITYKNTYLYGIYPPDDSVIISSLQQCEQLCQNDPQCTVATFSNNGSPQCSIKKTKYITGYADPSLSTTSFVKRCSGPFAVNPSLMKPLPPKPPPRICVSCVMGATSGTFLIFAMLQLGIVFFIYRRKNSTMRKVTLAFTCSNSKGLTVLSFSEIKSITGDLKNQIGPNMFKGVLPNNHLIAVKNLNASIEERKFRSAVIKIGSIHHKNLVKLEGYCCEFNHRFLVYEYAKNGSLDKYLDDCTLCKRLTFRKRVEICSSVAKAICYLHSGCREFVSHGNLKCENVILDENSVAKVTEYGFAIVNGEATYCGFSAEKDVRDFGKLVLTLLTGCRDHEELCEWTYKEWAEGRAGNVVDKRIDGDANSEELERALRIAFWCLQMDERRRPSMEEVVRVLEGTLNVDPPPPPFAFNRPLQEDDDSQEIGSE. 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02905 758 Gene3D Transferase(Phosphotransferase) domain 1 561 734 - -
Seca1g02905 758 SMART blect_4 35 156 IPR001480 -
Seca1g02905 758 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 275 IPR036426 -
Seca1g02905 758 SUPERFAMILY Protein kinase-like (PK-like) 502 728 IPR011009 -
Seca1g02905 758 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 163 IPR036426 -
Seca1g02905 758 PANTHER OS07G0415500 PROTEIN 13 741 - -
Seca1g02905 758 ProSiteProfiles Protein kinase domain profile. 441 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g02905 758 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 457 560 - -
Seca1g02905 758 Pfam Protein tyrosine and serine/threonine kinase 509 634 IPR001245 GO:0004672|GO:0006468
Seca1g02905 758 Pfam S-locus glycoprotein domain 245 308 IPR000858 GO:0048544
Seca1g02905 758 CDD B_lectin 45 156 IPR001480 -
Seca1g02905 758 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 155 - -
Seca1g02905 758 MobiDBLite consensus disorder prediction 735 758 - -
Seca1g02905 758 ProSiteProfiles PAN/Apple domain profile. 326 406 IPR003609 -
Seca1g02905 758 Gene3D Phosphorylase Kinase; domain 1 455 560 - -
Seca1g02905 758 SMART ntp_6 327 405 IPR003609 -
Seca1g02905 758 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 156 275 - -
Seca1g02905 758 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Seca1g02905 758 Gene3D - 155 276 IPR036426 -
Seca1g02905 758 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 640 735 - -
Seca1g02905 758 Gene3D Hepatocyte Growth Factor 323 408 - -
Seca1g02905 758 ProSiteProfiles Bulb-type lectin domain profile. 157 276 IPR001480 -
Seca1g02905 758 Pfam PAN domain 332 406 IPR003609 -
Seca1g02905 758 PIRSF SRK 2 641 IPR024171 GO:0004674
Seca1g02905 758 PIRSF SRK 638 758 IPR024171 GO:0004674
Seca1g02905 758 Pfam D-mannose binding lectin 82 169 IPR001480 -
Seca1g02905 758 Gene3D - 25 154 IPR036426 -
Seca1g02905 758 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 561 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02905 Seca-Chr1 80280522 80282798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02905 445 748 Receptor kinase-like Gene Family AT3G45860 28.857 2.15e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca1g02905 PK_Tyr_Ser-Thr 4.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02905 - - gmx:100809478 1287.71