Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02900 ATGACATCTGATGCATGGAGTTTACTAGTGAAGAGGATGGTCGTCTCTTTTACCAATCATATGCAAAGTGCCATGGTTTTGTTGTTAGGAAAGATGAGGTATGTCGAGATTTTAAAGGGAATGTTATCATGCGTTAGTTTGTGTGCAACAAATAGGGTAGTAAGAACTGAAAAACATTTCATGAAAGTGGATAGGAAAAAAGAGCATAGGCCAATAACTTGTGTGAGGTGTGAAGCTAAGCTAAGAATTCGCTTAAATTATAAGACATCAAAATGGAATGTGGTATCTTTTGTGGAGACTCATAATCATGAGCTTCCCCCTTACAATTATGTGCATTTATTACCTGCTTATAGAGGCCTAACTGATGCGGATAAAGCTCAAGTAGATAGGTTGCATGCATATGGTGTTAGAACATGCCACATAATGGGATACATGTTAGATCAAATGGGGGGATATGCTTCGCTTGAGTTTTGTAGAAAGGATTTGTATAATTATATTGAACGACAGAAACTTGAAAAGATTAAAGATGGGGATGCACATGCAACCTTATGTTATATACAAGCAAAGGCAAACAATGATCCCACACTTCGTTGTAGTTTCCTTGCGACAGATGATGGTTGTTTGAGAAATTTATTTTGGGCAGATGGGGGCAGTATGGGTGATTATTACTGCTTTGGGGATGTTCTTGCATTTGACACAACTTATAGGAAAAACCGATATAACAAACCTTTGGTTATATTTTCTGGTTGTAATCATTATGGCCAGACAGTTATTTTTTGTTGTGTGTTGGTTGCCGATGAGACTATTGAAACTTATAAGTGGTTGTTAGAAGAATTTCTCCGTGCTATGTCATATAAACATCCTGCTGCAATAGTTACAGATGGAGGTAGTAGTATGAGAGAGGCTATCAAGCAGGTGTTCTCGAATGTTTCACATCGCCTTTGTGCATGGCATTTGCACAAAAATACATGTGAAAATGTTAAGAATTCGGGATTTTTGGATGATTTTAAGGTAGCCATGTATTCTAATTTCACTGAGGAAAAATTTGAAGTGTATTGGAAGCGAATGGTTGCAAAACATGGTCTTGTAGGAAACAAGTGGGTGACTAAAACCTATGAAAATAGGTCAATGTGGGCTAGTGCATATTTTCGTGATAAATTCTTTGGTTGTATTAGAACAACATCACAATGTGAGGCAATTAATTCCTTGGTGAAGGCGTATGTTAATAAGAAAGATACTATTCTTGAATTCATTAATAGGTTTGAGCAAGTTTTGAGAGAATATACGAAGAATGAGATGATTGCAAAATTCAAGTCTATGTTTACTCAACCCATTTTAACAACCTCTCTTCAGAAAATTGAGATTGAGGCAGCAAAAATATTCACGTTGGAGATTTTTAGGGAAGTGAAATATGAGATTGAGGTTGCTTGTGCTTTAAATGTAATTGCAAGAGAGGAAAATGGAGAGAAGCTTATTTTTAAGATGAACCCATACGGTAAACCTGGCCATGATGTTCAGGTGGTGTATGATGTTGTCAATTCTCAATTTCTATGTGATTGTAGACTGTTTGAGAGTCGTGGAATCCCTTGTTCTTATGTAATATTTGCAATGAAAAATGAAAACATGCAATCCATTCCAAGAAGCTTGATTTTGAATCGTTGGACAAAGAAGTGCAAGAGTGATCTTATTTCCTCATATCAATCAGAGGATGTGGACACTGACGTCATGAAAACTGCCCGTTTAGGGGCTACTGGAGGAGTTTTCCAAAGGTTGGGTTGTATTGTTGTAGAAAAGAGAGAATACTTCAATAATATAATGGAAGATTTGTTGAAGGTGGCAAATAAATATGAGATGATTGGGGAAACACGTGCCACACAAACCAATCGTGAAAAGATTGTGAAAGATCCACCGGTTGTAAAAACAAAAGGAGCACCACAAAAAAAAGTATGGGAGAAAAAGGAGAAGATGCTCAAAGTGCAATAG 1983 0.3676 MTSDAWSLLVKRMVVSFTNHMQSAMVLLLGKMRYVEILKGMLSCVSLCATNRVVRTEKHFMKVDRKKEHRPITCVRCEAKLRIRLNYKTSKWNVVSFVETHNHELPPYNYVHLLPAYRGLTDADKAQVDRLHAYGVRTCHIMGYMLDQMGGYASLEFCRKDLYNYIERQKLEKIKDGDAHATLCYIQAKANNDPTLRCSFLATDDGCLRNLFWADGGSMGDYYCFGDVLAFDTTYRKNRYNKPLVIFSGCNHYGQTVIFCCVLVADETIETYKWLLEEFLRAMSYKHPAAIVTDGGSSMREAIKQVFSNVSHRLCAWHLHKNTCENVKNSGFLDDFKVAMYSNFTEEKFEVYWKRMVAKHGLVGNKWVTKTYENRSMWASAYFRDKFFGCIRTTSQCEAINSLVKAYVNKKDTILEFINRFEQVLREYTKNEMIAKFKSMFTQPILTTSLQKIEIEAAKIFTLEIFREVKYEIEVACALNVIAREENGEKLIFKMNPYGKPGHDVQVVYDVVNSQFLCDCRLFESRGIPCSYVIFAMKNENMQSIPRSLILNRWTKKCKSDLISSYQSEDVDTDVMKTARLGATGGVFQRLGCIVVEKREYFNNIMEDLLKVANKYEMIGETRATQTNREKIVKDPPVVKTKGAPQKKVWEKKEKMLKVQ. 661
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02900 660 Pfam MULE transposase domain 228 322 IPR018289 -
Seca1g02900 660 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 583 IPR031052 GO:0006355
Seca1g02900 660 Pfam FAR1 DNA-binding domain 60 105 IPR004330 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca1g02900 Seca-Chr1 80226755 80228737 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02900 MULE 4.6e-27 CL0219
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02900 - - ccaj:109792835 727.243