Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02818 ATGATTGGCCCAATCGATGCTAAAACAAAGCAAAGGAAGGTTATTAATCGTAACAAGCGTGTGAGATCAACTGAATTGGCACGGCCTGAAGAGTGTATCTTTTTGCAGCTCGGTGAAGGTTTAAAGGAAGAGAGTACTGATACTGATAAGAATATGATAACTATGTTTAACATCTTAAGGATAAATAAAGTTGTCAAGCTTCAAAATCTGGTTTTGAATAGGAACTCCTTTGCACAATCAGTGGAGAATTTGTTTGCTTTATCTTTTTTAGTCAAAGATGGTCGGGCTGAAATCAAAGTGGATGAGGCTGGACGGCAGCTAGTGTCACCAAGGAATGCTCCTGCTGCAGATGCAGTTCTTTCAAGGGATGTTGCTTTCAACCACTTTGTATTCCGATTTGATTTTAATGATTGGAAGGTATGTTGGAAACAATTTTCTTTTGATCATCTTTTTCTGGTAACTGCATGTACCTATTAA 477 0.3795 MIGPIDAKTKQRKVINRNKRVRSTELARPEECIFLQLGEGLKEESTDTDKNMITMFNILRINKVVKLQNLVLNRNSFAQSVENLFALSFLVKDGRAEIKVDEAGRQLVSPRNAPAADAVLSRDVAFNHFVFRFDFNDWKVCWKQFSFDHLFLVTACTY. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02818 158 Pfam Nse4 C-terminal 65 147 IPR014854 -
Seca1g02818 158 PANTHER UNCHARACTERIZED 1 143 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02818 Seca-Chr1 78045309 78047208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02818 1 140 Non-SMC Element family AT1G51130 57.143 1.71e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02818 K22825 - gmx:100781485 211.075