Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02810 ATGGGAATGGACAGAGTGCAAAGTGCCTATGAGCCCTTGGATGAAGCGTTTGAAATTGGGAAAGAATCGTATCGGGGGCAGCAATACAGCCAGATTTACTTCGCTCGCCTTCACTTGATGAGAACACTCTTGTATTCCCTTGTTCCCCATTGGAAACCCAATTTTCCTGTATGCACAGTGTTGGGATTGGAAGAGGGCAAGGAGTGTATCATTGTTGGAACCCTCTATAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCCAAGCAGAAAACGGTGGTTCCACTTGTCAGGCCGCATAACTTTGTGCATGAAGATGATTATCTAGTTTTGGAAGATGAAAGTGGGAGAGTTAAGCTCTGTGGGAGTGATATTTCACCATCTGTGTATGTAACAGGAATAGTGGTTGCTTTACATGGAAAGGAAACAGGGGCAGGTGAATTTTTGGTTCATAATGTTCTAGAAGCTGGGTTACCACCACAGATAGAATTTCCTCTTAAATCAAGGGAAGACAAATATGTTGTTCTTGTGTCAGGATTAAGTGTTGGGAGCAGCAACTCTAATCCACTTCAGTTTCAGCTTCTCATTGATCATATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCGCAAATTGTTCATGTGGTCATAGCTGGAAATTCGGTTGAAATACCTCGTGGACTAGTTAATGGACAGAATTTGGCCTCAAAAGATCTCTCGAGAATCTCAGAACCAATAAAGGAGCTAGATATTCTGTTGAATCAGATTACTGCTGGTTTGCCTTTGGATATCATGCCAGGCCCCAATGATCCTTCTAATTACTCATTGCCACAGCAGGTTCTTATGTTGTCCTTTAACAGTATATATATGCCATATACAACATGTGCTGTTTGA 909 0.4169 MGMDRVQSAYEPLDEAFEIGKESYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNFPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKQKTVVPLVRPHNFVHEDDYLVLEDESGRVKLCGSDISPSVYVTGIVVALHGKETGAGEFLVHNVLEAGLPPQIEFPLKSREDKYVVLVSGLSVGSSNSNPLQFQLLIDHITGHLGDEKEQSIASQIVHVVIAGNSVEIPRGLVNGQNLASKDLSRISEPIKELDILLNQITAGLPLDIMPGPNDPSNYSLPQQVLMLSFNSIYMPYTTCAV. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02810 302 Gene3D - 34 158 - -
Seca1g02810 302 Pfam DNA polymerase delta subunit OB-fold domain 28 154 IPR040663 -
Seca1g02810 302 Gene3D - 167 295 - -
Seca1g02810 302 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 6 287 IPR024826 -
Seca1g02810 302 FunFam DNA polymerase delta subunit 2 34 158 - -
Seca1g02810 302 Pfam DNA polymerase alpha/epsilon subunit B 176 286 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02810 Seca-Chr1 77852977 77859525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02810 4 299 Core DNA Replication Machinery Family AT2G42120 72.635 1.00e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02810 K02328 - gmx:100780072 495.738