Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02794 ATGATCCCTCCGGCGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGATGAGGATGTTAGAAAGAAAGATATTGGAGATTCAGGAGAGAAGGGTAATCATACCAGAAAAGGAAGCAACTTTGCATTGGAAATGCATGCTGAGGTCTTCCCACAGTCTACTCAAGGTGTATACAAAGACTATTTTTTTTATATGCATGTATTATTTGGAGCTGTTGCTGAGTTATTTTGAAACTGTATATGTAGATGAGAGATGGTGTGAAGGAGAGAAAGCTATTCCACTGAAGAAAAGAAGAGGGAGTTTCGAGAATGGTATCACTCTGGGAAATAGTAAGAAGATGGTGAAGCCTAAGATGAAGACAAGGATGAACAAGAAATGTTCAACTCGAAATGGCGATAATATGGAACAAGAAGAAGATGAAGATGAGAAAGAAGAGGTACATGAAACTAAACCGAATAAGAAGAAGTCAAGGGGCAGTGCACTCATGGAAGGTTCAAGGTGCAGTCGTGTTAATGGGAGAGGATGGAGGTGTTGTCAACAAACACTTGTGGGTTACTCTTTGTGTGAGCATCACTTGGGGAAAGGAAGGCTTAGAAGTATGACAAGTGTTCGAAGCCGTTCTATTGCTACTTCTATTGCACCAAAGAAGGTACTTGATGCTTCTCTATCTTTATCAGTACCTAGTGCTTCATCTTCTTCTCTTGATAAGCAAAACAACAAGTCTGAGAATGATGAGAAGAAGCCAGTGATAATCACAAAGAAGAGGATGAAGCTGGGAATGGTGAAAGCAAGGTCCATAAGCAGCTTGTTGGGACAACCAAACACTCAGGTTGTTGTGTCCGAGGAGAGTAACAACTAA 867 0.4141 MIPPAKVGHTDSTTSKTLWMRMLERKILEIQERRVIIPEKEATLHWKCMLRSSHSLLKVYTKTIFFICMYYLELLLSYFETVYVDERWCEGEKAIPLKKRRGSFENGITLGNSKKMVKPKMKTRMNKKCSTRNGDNMEQEEDEDEKEEVHETKPNKKKSRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIATSIAPKKVLDASLSLSVPSASSSSLDKQNNKSENDEKKPVIITKKRMKLGMVKARSISSLLGQPNTQVVVSEESNN. 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02794 288 MobiDBLite consensus disorder prediction 117 166 - -
Seca1g02794 288 ProSiteProfiles WRC domain profile. 164 208 IPR014977 -
Seca1g02794 288 PANTHER EXPRESSED PROTEIN-RELATED 85 273 - -
Seca1g02794 288 MobiDBLite consensus disorder prediction 229 256 - -
Seca1g02794 288 MobiDBLite consensus disorder prediction 148 163 - -
Seca1g02794 288 Pfam WRC 166 206 IPR014977 -
Seca1g02794 288 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02794 Seca-Chr1 77698660 77700949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02794 153 206 GRF Transcription Factor Family AT3G52910 35.185 5.85e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02794 - - gmx:100810559 236.884