Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02793 ATGCTCTGTTCCACTCCTTATTCCCTATTTGCTACCATTATTTTTGCAACTCTAATCCTTCTTCATCCATCAAATGCTCAATTGAGTTCAACCTTCTACTCCAACACATGCCCCAATGTGTCTTCTATAGTGACAAGTGTTATTCAGCAGGCTCTGCAATCTGATCCTCGTATAGGCGCAAGCCTAACTCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGTGATGCATCGGTTTTGTTAGATCAGGGTGGCAACATAACACTGAGTGAGAAAAATGCAACTCCTAACAATAATTCAGCTCGTGGCTTTGATGTAGTTGATAACATTAAGACCTCCCTTGAAAATTCATGCCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAGCTTCTGTATCTTTGGGAGGAGGTCCTTCATGGAGCGTACTACTTGGTAGAAGGGATGGTCTAATTGCAAACCAATCTGGTGCCAACACCTCCATTCCCACTCCATTTGAAAGCCTAGCTAACATCTCAGCCAAATTTGCTGCCGTTGGCCTAAACACAACTCATCTAGTTGCATTATCAGGTGCACATACATTTGGTCGTGCACAATGTCGATTTTTCAACCAGAGGCTCTTCAATTTCAGTGGCACAGGTAGCCCTGATCCCACACTGAACTCAACATATCTGGCTACTCTGCTGCAAAATTGTCCACAAAATGGAAATGGGACCACTCTCAACAACCTTGACCCTTCATCCCCAAATACTTTTGACAACAATTACTTCAAAAATCTTCTTAACAATCAGGGCCTTCTCCAATCAGATCAAGAGCTATTTTCTACCAATGGCTCTGCTACAATCTCCATTGTTAACAACTTTGCCAGCAACCAGAGTGCCTTCTTCCTAGCCTTTGCTCAGTCCATGATTAATATGGGTAATATTAGCCCATTGACAGGAAATCAAGGAGAAATCAGATCCAATTGTAGGAAAGTCAATGGAAGTTGA 999 0.4224 MLCSTPYSLFATIIFATLILLHPSNAQLSSTFYSNTCPNVSSIVTSVIQQALQSDPRIGASLTRLHFHDCFVNGCDASVLLDQGGNITLSEKNATPNNNSARGFDVVDNIKTSLENSCPGVVSCADILALAAEASVSLGGGPSWSVLLGRRDGLIANQSGANTSIPTPFESLANISAKFAAVGLNTTHLVALSGAHTFGRAQCRFFNQRLFNFSGTGSPDPTLNSTYLATLLQNCPQNGNGTTLNNLDPSSPNTFDNNYFKNLLNNQGLLQSDQELFSTNGSATISIVNNFASNQSAFFLAFAQSMINMGNISPLTGNQGEIRSNCRKVNGS. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02793 332 Gene3D - 32 330 - -
Seca1g02793 332 SUPERFAMILY Heme-dependent peroxidases 27 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 FunFam Peroxidase 31 178 - -
Seca1g02793 332 FunFam Peroxidase 166 309 - -
Seca1g02793 332 Pfam Peroxidase 45 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PANTHER PEROXIDASE 72-RELATED 22 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 Gene3D Peroxidase, domain 2 166 309 - -
Seca1g02793 332 CDD secretory_peroxidase 27 329 IPR033905 GO:0004601|GO:0042744
Seca1g02793 332 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g02793 332 ProSiteProfiles Plant heme peroxidase family profile. 27 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02793 Seca-Chr1 77677189 77679605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02793 24 332 Peroxidase AT5G06720 76.052 7.82e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02793 K00430 - gmx:100810355 577.4