Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02785 ATGGAGGGTGGGAATTCTGATTTTGATCTTGACAAGTTGGGTCTTTTTTTCTTCATGAGTGGCAACATTGAACATTGCAAAAATGGTCAAAAACTTATTGCCCTAGTCATGTATGTTAAACACCACCCTCCCTGTGGCACCACCGTCTCTCCACGAATTCAGTCCTCCAGTTTGAATACTTTGACACCATCTTCTTCGGGCTCAACAAGGCTTAGTGTAGGTGTGAGTTAG 231 0.4329 MEGGNSDFDLDKLGLFFFMSGNIEHCKNGQKLIALVMYVKHHPPCGTTVSPRIQSSSLNTLTPSSSGSTRLSVGVS. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02785 76 MobiDBLite consensus disorder prediction 49 76 - -
Seca1g02785 76 SUPERFAMILY Cupredoxins 2 37 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02785 Seca-Chr1 77553689 77553947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02785 1 42 Phytocyanin Superfamily AT1G79800 52.381 2.46e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02785 - - lja:Lj0g3v0319029.1 72.4034