Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02737 ATGGTGTCATTTCTGCACATACTTTTGGCTCTTCCTGTGGTGGCATTCATCCTCTTCATGAAATACAAAACCATTAAAAACCCATCAACCCGTCCACCAGGTCCAAGAGGCCTTCCCATCATTGGCAACCTTCATCAACTTGACAGCTCAAATCTCCATTTGCAACTGTGGAAGCTATCAAAGATCTATGGTCCCTTTTTCTCCCTGCAAATTGGCTTCAAGCAAGCCATTGTTATTTCTACACCTAAGCTTGCAAAAGTGATCCTCAAGGACCATGACCTTGATGTTTGCAGCAGATATCCCTCCCTTGGCCCACAAAAACTGTCTTACAATGGGTTAGAAATGATATTTTCCCCATATAACGACTACTGGAGAGAAATCAGAAAAACTTGTGTAGTCCATTTCTTCAGCTCCAAAAAGATCTCTACCTTTTCTCATGTAAGAAAATCTGAGGTCATTCAAATGATAGAAAAGATATCTGGGCATGTCTGTTCTTCCAAAATCACAAACTTGAGTGAGATCATAATGTCTGTCTCAAGCTCTATAATCTGTAGGATTGCTTTTGGGAGAAAATATGAGGAGGAAGGAGCTGAAAAAAGCAGATTCCATGGGCTGCTTAATGAGACTCAGGCCATGTTCCTTTCCTTCTTTGTCTCCGATTATATTCCTTTCATGGGGTGGATTGATAAACTCAGAGGGTTAATTGCTCGTCTTGAAAACACGTTCAAGACATTGGATGTGTTTCTCCAAGAAGTTCTTAATGACCACCTCGATCCTCATAGGGAGAAAGAAACCCAAGAGGAGGATATAGTTGAAGCATTACTTCAACTCAAGAAGCAGGGTCGTTTGTCAATGGATCTCACCAATAATCACATCAAAGCTGTCTTAATGGTAAACCTACTAGTAGCAGCAACTGATACAAGTGCAGCCACATCAGTTTGGGTGATGACTGGATTGATGAAGAACCCAAGAGCAATGAAGAAAGCTCAAGAAGAAGTCAGAAATCTCTATGGCAAGAAAGAGTTCATCGATGAAGATGATATTCAAAACCTTGTGTATCTGAAGGCAGTGGTAAAAGAGACACTGAGATTTTATGCACCGGCACCCCTAATACCAAGAGAAACCAATAAAAGTTTCATTTTAGAAGGGTATGAAATACAGCCCAGGACATTAGTGTATGTAAATGTTTGGGCCATTCAAAGGGACCCTGAGGCTTGGAAAGACCCACATAAGTTTTATCCTGAGAGATTCTTGAACAATGATATAGATTTTAAGGGACAAGATTTTGAGCTGATTCCATTTGGTTCAGGGCGTAGAAGTTGCCCTGGCATACCACTTGGAATTGCCACTGTGGAGCTCATAACTGCAAATCTTCTCAATTCATTTGATTGGGAAATGCCTCAAGGGATGACAAGGGAAGACATAGACACTGAAGGGCTGCCAGGACTTGCCAGACACAAGAAAAATCATCTTTGTCTTGTTGCCAGGAGCCGTGTGTGA 1500 0.4147 MVSFLHILLALPVVAFILFMKYKTIKNPSTRPPGPRGLPIIGNLHQLDSSNLHLQLWKLSKIYGPFFSLQIGFKQAIVISTPKLAKVILKDHDLDVCSRYPSLGPQKLSYNGLEMIFSPYNDYWREIRKTCVVHFFSSKKISTFSHVRKSEVIQMIEKISGHVCSSKITNLSEIIMSVSSSIICRIAFGRKYEEEGAEKSRFHGLLNETQAMFLSFFVSDYIPFMGWIDKLRGLIARLENTFKTLDVFLQEVLNDHLDPHREKETQEEDIVEALLQLKKQGRLSMDLTNNHIKAVLMVNLLVAATDTSAATSVWVMTGLMKNPRAMKKAQEEVRNLYGKKEFIDEDDIQNLVYLKAVVKETLRFYAPAPLIPRETNKSFILEGYEIQPRTLVYVNVWAIQRDPEAWKDPHKFYPERFLNNDIDFKGQDFELIPFGSGRRSCPGIPLGIATVELITANLLNSFDWEMPQGMTREDIDTEGLPGLARHKKNHLCLVARSRV. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02737 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Seca1g02737 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 Coils Coil 326 346 - -
Seca1g02737 499 CDD CYP71-like 63 491 - -
Seca1g02737 499 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 PANTHER CYTOCHROME P450 71B11-RELATED 18 496 - -
Seca1g02737 499 FunFam Cytochrome P450 83B1 18 494 - -
Seca1g02737 499 Pfam Cytochrome P450 32 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g02737 499 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02737 Seca-Chr1 76087874 76090108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02737 5 499 Cytochrome P450 AT4G31500 45.892 2.87e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02737 - - gmx:100806470 739.954