Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02730 ATGAAGAGGCAAAGAAGAATGAAAAGAACGTGTATTGTTTGGATTGTTGCATCAGTCTCTGCCCTCACTGTTTGTCCCCTCATCGCCCTCACAGACTCTTACAGGTTCTGCTTTCTCAATTTCACCCAAACATTACCTTACCTTTTCTCTATTCTTGCTCTGAATTTAGTATTAATGCCATCTTTTCAGATAAGAAGATATGTCTATCACGATGTTATAAGGTTGGACGATGCTGCAAAGTTAATTGACTGCACTTCTGTTCAATCCTACACAACCAACAGTGCAAAAGTGGTATTTCTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCACTTCTGCTCTCTCTCTTGCAAGATCAATCACCTCATCAGAACAGCGGGTTCTCTCTCCGGTTACCTTTACGAGTGCAACTACCTTGCCTTGCCGGATTCTGGGCTCGACGACAGTCTCATGACCCCTGACTCGGTCCTCGAACCGGCGAGAACATCGTCCAGTTCGGGTGGTTATGATGGAGTCGATTGCAGGACCACACTTGCTTGCACTGCCACCACTGAGGTTGTGAGGAAGAAGAGGACCGGCGGCTCCAATTTCCGGCCACCGTGCCGGCCGGCATGCTCGCCAGTGTCGGAAATCTCGGCCGGTCTGATGAACCGGAGGAAGGGGACACCCCAGAGGGCCCCACTCTATTGA 741 0.4966 MKRQRRMKRTCIVWIVASVSALTVCPLIALTDSYRFCFLNFTQTLPYLFSILALNLVLMPSFQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYHFCSLSCKINHLIRTAGSLSGYLYECNYLALPDSGLDDSLMTPDSVLEPARTSSSSGGYDGVDCRTTLACTATTEVVRKKRTGGSNFRPPCRPACSPVSEISAGLMNRRKGTPQRAPLY. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02730 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 62 245 - -
Seca1g02730 246 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02730 Seca-Chr1 75521992 75524268 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca1g02730 PLATZ 2.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02730 - - pvu:PHAVU_008G142900g 352.058