Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02632 ATGTCATATATCTGTACTAAATACATCCCTGTGAGGGAAATTGCACCGCAGAAGGAATATTGGATCATAAGGGCTAGGATTATAAGATTGTGGGCAGTCACAGATTGCAGAGACAAGTTCCGTGTGCTGTCTTACGAGATGGTCTTCATTGACAGACATGGTGACAAGATCCAAGCTTCCATTAGCAAACAGATGTGCATCATTAAGAATTGTCACATGGAGGAAGGACACTTCTATGATATCAAGGATGTCCTTGTGGTTCCTAATGATGGTTGTGACCGACCAACGCGCCATCCTTTTCGATTGGTGATTGAAAGGCGCTCTTCATTTTGCAGGGCTGAACCTCTTCCATTTAGATCCTTTGGGTTATCACCGCTTAGTTCTGCCGAAATTCCGCGGACAAAACATGATAGTCAATTTCTCGTGGACAAAGTGGGTTTACTTACTGCTGTTTCTTGCGAACGAGAATACATTATGGATGACAAAGAAACTAGATTGGCATTTCTAGAGATAACCGACCCGACTGGGAAGGTTGAATGTGTGTTGTACGATGCTTATTTGGATGAACTCATTGAGTTCCTTAAAACTAATGGGCCTTGCACACCAATCATTTTGCTCCAGTTTGTACGAGTGGTTCCAGACGCACAAGTTCTTTATGGGGATGTTGGGATTGAAAGTGTTCCAAATATCACTCGCCTGTTATTCAACCCTTCCATACCAGAGGCTTTTGACATGAATGGCTGGTTAACCATGAGTGGATTTAGTCTTGACGGGAGGATTCAGTATCGACAAATGGAAATGCCATGTCTTACCTTGCGTGATGAGTTCCTGCTTCACCATCAAAGGAAGGATATAGCTGATTTAAACACCAATGGAAAGGTGGGTGGCCTACTTGTGGTTTGTGCTATGATCACATCATTCATGGATAACGAGGCTTGGTGGTACACAGCATGTCGACCTCATGCTTGCAGCTCTAAGGGTAGTTCCCTGTACACATGCGATGGTGATTACTCCATTATACCTAGATATTCTGTAAAGGTTGAAGTGTGCGATGGAAAAGATTCAACCTACCTAATCCTAGGAGATGAACATATTGAGAAATTACTCGAGATTTCATGCAAAGATATGTTGTCCACAATATCTGATCCCTCCGTTGCTGCATATCCAGCCATCTTTGACCATCTCATTGGCATGAGGATGTTGTTCTTGGTTGAGACAACAACGACCAATAATGTACAGGAGGGTTGCATTCGGGTTAAAACAATTTGCACTGACAGGGAATTAATGCGGATGTGCTTGAAGGGACAATATTTTCGTGTTGACCGAAGGCCACGAACAACAATTGCAGTGATGTTAGGTGAGACGAGTAATGCAAGACAATTCACCCATGCAGAGTGTAGTTCATATGCAAGTGCTCGCCCAGCAGAAAATTTTGCAACTGCAAGTTCAAGAACTGCTCAGAGGTCTGGAGCTGGTAGTGCTTCTGTCAATTACAACCAACAAATTAACGCTGAAATGAACAACACCCCCCAAGTTGTGAAGCATTGTGTCCACATGACACAGAGGTCTACCGACGGCTGA 1581 0.4352 MSYICTKYIPVREIAPQKEYWIIRARIIRLWAVTDCRDKFRVLSYEMVFIDRHGDKIQASISKQMCIIKNCHMEEGHFYDIKDVLVVPNDGCDRPTRHPFRLVIERRSSFCRAEPLPFRSFGLSPLSSAEIPRTKHDSQFLVDKVGLLTAVSCEREYIMDDKETRLAFLEITDPTGKVECVLYDAYLDELIEFLKTNGPCTPIILLQFVRVVPDAQVLYGDVGIESVPNITRLLFNPSIPEAFDMNGWLTMSGFSLDGRIQYRQMEMPCLTLRDEFLLHHQRKDIADLNTNGKVGGLLVVCAMITSFMDNEAWWYTACRPHACSSKGSSLYTCDGDYSIIPRYSVKVEVCDGKDSTYLILGDEHIEKLLEISCKDMLSTISDPSVAAYPAIFDHLIGMRMLFLVETTTTNNVQEGCIRVKTICTDRELMRMCLKGQYFRVDRRPRTTIAVMLGETSNARQFTHAECSSYASARPAENFATASSRTAQRSGAGSASVNYNQQINAEMNNTPQVVKHCVHMTQRSTDG. 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02632 526 SUPERFAMILY Nucleic acid-binding proteins 136 257 IPR012340 -
Seca1g02632 526 Gene3D - 278 434 IPR012340 -
Seca1g02632 526 Gene3D - 7 114 IPR012340 -
Seca1g02632 526 SUPERFAMILY Nucleic acid-binding proteins 8 116 IPR012340 -
Seca1g02632 526 SUPERFAMILY Nucleic acid-binding proteins 284 428 IPR012340 -
Seca1g02632 526 CDD RPA1_DBD_A_like 23 102 - -
Seca1g02632 526 Gene3D - 117 255 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02632 Seca-Chr1 68724886 68727561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02632 7 378 Core DNA Replication Machinery Family AT2G06510 21.615 5.42e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02632 - - mtr:11425976 230.335