Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02610 ATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGACTTAGGGAGGCAAAGGCCTTGACCCGAACTGATTGTAAAGCAAGGCTCTGTGTTTCCTTACATTATAGAAGTAGAAAGTGGAGGGTTAGAATCTTTGAGCCAGCTCATAACCATGAATTGACTCCTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCGGATAAGGCACAAGTTGACGGTCTACATCATTATGGTGTCAGGACTTGTCATATAATGGGTCTTATAATGGGTCAAAAGGGAGGCTATTCTGATCTTGGTTTTTGTAAGAAGGATTTGTACAATCATATTGACAAAGAGAATCGGGAAAAAATAGAGGATGGGGATGCTTTTGCTGCGTTGTGTTACCTTCAATCAAAGTTTGACAACAATCCAATGACATTTATAAAGTTTACAACCATTGAAGATCATAAACTTGAAAACCTGTTTTGGTCTGATGTAGGAAGTAGAATTGATTATATTTGTTTTGGTGATGTAGTTGCTTTTGACACAACGTATAAGAAAAACAAGTATAACAGGCCATTAGTAATTTTTTCTGGTTATAACCATCATGGTGAAACCACTATTTTCGGTTGTGCTCTTGTTGGTGATGAGAAGATTGAAACCTATAAATGGGTGCTGGAATCATTTCTTGAAGCAATGTTCAATAAAGTTCCTAAGGCTGTGGTTACTAATGGAGATGGTGCAATGCGTGAAGCTATCAGGTCTGTTTTTCCCGGTGCTCTTCACAGGTTGTGTGCATGGCACCTTCACCAAAATGCTTGTGAGAATGTTAAGAATCCCAAATTCCTTGAAGATTTTAAGACCTTAATTTATGGAAATTTTACTCGTCAGAAATTTGAGGATGAGTGGAACAAGGTTGTTAACAAACATGGTGTGAGGGAAAATAGGTGGGTTAGAAAAGTATATGACATGAAGAGGATGTGGGCCACGGCATATCTGAGTGATAATTTTTTTGGGGGTATCAAGACAACTTCTATATGTTAA 1065 0.3831 MRQLVCNREGERSEKHLNRTDRLREAKALTRTDCKARLCVSLHYRSRKWRVRIFEPAHNHELTPASMIHLLPAYRGLSVADKAQVDGLHHYGVRTCHIMGLIMGQKGGYSDLGFCKKDLYNHIDKENREKIEDGDAFAALCYLQSKFDNNPMTFIKFTTIEDHKLENLFWSDVGSRIDYICFGDVVAFDTTYKKNKYNRPLVIFSGYNHHGETTIFGCALVGDEKIETYKWVLESFLEAMFNKVPKAVVTNGDGAMREAIRSVFPGALHRLCAWHLHQNACENVKNPKFLEDFKTLIYGNFTRQKFEDEWNKVVNKHGVRENRWVRKVYDMKRMWATAYLSDNFFGGIKTTSIC. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02610 354 PANTHER OS01G0519700 PROTEIN 2 332 - -
Seca1g02610 354 Pfam MULE transposase domain 185 279 IPR018289 -
Seca1g02610 354 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02610 Seca-Chr1 68028185 68029249 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02610 MULE 3.5e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02610 - - ccaj:109792835 472.241