Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02567 ATGACGAAAACTGAATTTCCCTCAGACATTAAGTTGGATGATGATAAACCTCCAATCATTCATTCTAATAGTGAATCTGATAATTTAAATGGTGTAGAGGAACATGATTTTTGTGAGAAGACTGAAAAGGAAGGGATTGGTTCACGGGATGATGAAGGTAGTAAGTTGTTTGACTTATCTGCTGATGAAATTTTATTGCGTGAGTTTGGCAGTGAACAAGAGGCATATGATTTCTATGAATGTTATGCAAATTATCATGGCTTTGTGGTTAGGAAAGATGACGTCACAAAGGATATTAGGGGTAATGTTATTATGAGGCAGTTTGTGTGCAATAGGGAGGGACTTAGAAACAAAAAGCACTTTCTGAGAGTGGATAGGAAGAGAGAGCATAGGCCACTTACCCGTACAAGGTGTCAAGCCAAGCTTCGTGTCCATTACCATCACAATAGTTTAAAATGGAAGGTAGTATCATTTGAGCAGTCTCATAACCATGAGCTTGCTCCATCTAGATATGTTCACCTACACCCTGCTTATCGTGGGTTAACAGATTGTGATAAGGCGCAAGTTGATCGTTTGCATGGTCATGGTCTTAGAGAAAGCAGTGGTGACATTGCAGCAAATGATATTGAGAAAGATGCGATGGATAGTGGTGAGGGTAATGGAAAGGAAAGTAATGCTGATGAGACTAAGGATGAGGATGAAACTAGACAGGAAAGAGACAGACCAGAAAAAAAAATCAGTTTGACTAATGTAAAAGACAAGTTGAGAGTAGTGTCTAAGAAGAAGGAAAAGACTATTATTGAAGAAAATAAACCAAAGCATGAAAAGGAACCGATAATCAATGTAGGTGGTTGTTCAATTGAAGAAAAAACTGAAAATTGTGAATTGCCTCCTATGGTCCCTAAGGGAAAGAAAATGAGGCAAGAAAAGAAAGCAAAGCATTATAAGGATGTGGCCTACAATATAGCATCATCTTCAATAGGAGAAAAAATTGAAAATTCCCAAGTCCCACCTCCAGTCCAGCCTATGGTCACGACCATGCATTTTCCTAGTAATGGGTATGGAAGCTTCAATCAAGGGTATCCACTATTTCCAAACTTTAGGGGTACTTCGATTCAGACTCATCATAATGCAGTGCCTTTTTACGGACACAATATGCATTATCCTTTCTACCACCATAATGCTCAACTTCCAATATATCCACAAGTACCCGGGTATTTTCCTGGAGTGTGGAACCCACCTAGCAATGCAACATCTATGAATGGTTTGTTGCAACAATTAATGAATAGTGGCGATAAAGAAAGTGGAAATGAAGTGAAACGTTAA 1326 0.3869 MTKTEFPSDIKLDDDKPPIIHSNSESDNLNGVEEHDFCEKTEKEGIGSRDDEGSKLFDLSADEILLREFGSEQEAYDFYECYANYHGFVVRKDDVTKDIRGNVIMRQFVCNREGLRNKKHFLRVDRKREHRPLTRTRCQAKLRVHYHHNSLKWKVVSFEQSHNHELAPSRYVHLHPAYRGLTDCDKAQVDRLHGHGLRESSGDIAANDIEKDAMDSGEGNGKESNADETKDEDETRQERDRPEKKISLTNVKDKLRVVSKKKEKTIIEENKPKHEKEPIINVGGCSIEEKTENCELPPMVPKGKKMRQEKKAKHYKDVAYNIASSSIGEKIENSQVPPPVQPMVTTMHFPSNGYGSFNQGYPLFPNFRGTSIQTHHNAVPFYGHNMHYPFYHHNAQLPIYPQVPGYFPGVWNPPSNATSMNGLLQQLMNSGDKESGNEVKR. 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02567 441 MobiDBLite consensus disorder prediction 1 21 - -
Seca1g02567 441 MobiDBLite consensus disorder prediction 1 30 - -
Seca1g02567 441 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Seca1g02567 441 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 225 - -
Seca1g02567 441 MobiDBLite consensus disorder prediction 212 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02567 Seca-Chr1 66390901 66394736 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02567 FAR1 8.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02567 - - ccaj:109792835 220.32