Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02510 ATGACACAAAATGGGCAGCCTTTTATGGATTTTGTTGTAGTGGGTTTGGACAAGGGAAATGAAGCAGAAGATCGCTGTCTAGAAGAGAGCACAAGTATAGTTGATGGAGTTGGAGTTGAAGTTCAAGAACCATATGTTGGTATGGAATTTGATTCTGAAGAAGCTGCTCGGAAATTTTATGTTGAATATGCCAGACGGGTAGGATTTGTTGTACGCATTATGCAACGTCGGCGTTCTGGAATTGATGGAAGGACTCTTGCTCGCCGACTTGGATGTAACAAACAAGGATTCTCACCAAATAACAAGGGAGCATTGGGGCCAGAGAAAAAGCCAAGACCTAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTGGTGAAGTTGGAAAAATCAGGAAAATGGGTTGTCACAAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGATTCAGCACAGCGGAACTCTAA 477 0.4256 MTQNGQPFMDFVVVGLDKGNEAEDRCLEESTSIVDGVGVEVQEPYVGMEFDSEEAARKFYVEYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGALGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFSTAEL. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02510 158 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 147 - -
Seca1g02510 158 MobiDBLite consensus disorder prediction 95 116 - -
Seca1g02510 158 Pfam FAR1 DNA-binding domain 58 147 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02510 Seca-Chr1 63772608 63775910 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02510 FAR1 2.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02510 - - vun:114183030 270.781