Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02485 ATGAGCAATAATTCCATTTTTGTAATTTGTTTATATTTTTTTCAGATACTCAACATACTTTACGTGGATGCACCCGTTGGTACGGGATATTCTTACTCAAAAACACAAGAAGGCTATTATAGTAGTGACACACAATTTGTGGAACATATCTATGATTTTTTACAAAAGTGGTTAGTGAACCATCCTAAATTTAGATCAAATCCACTTTACATTGGTGGTGGTTCATATTCAGGCAAGATCATTCCTCCCCTTGTTCAAAAAATATATGAATATTATAAAGTAGGACACTCACCAATTCGAAACATCCAGGGCTTTGTGCTTTCAAGTCCAAGACTTGATTCTCACATGGACAATAACTCAAAAGTTGAATTTGCTCATCAACGAACACTTATATCAGATGAACTATACGAGTCAATTAAATCTAGTTGTAATGGTGATTATATAAATCGCGATCCAAACAATACAAATTGTACGTCAGATTATGAAGCCTTCTTTGAGTTAGTTCGTTATATAAATGAATTTCAAATTATGGAACCGAGTTGTATGTGTGGATCTTACGAGAATCAAAGAATTCTTTCTAAGGAGTTTGAAGGTATCCGCAATAGAAGATTTAGGTGTCGGGGAACTAAAGGGCACTTCCAAAGATGCAATCGTAGTATGGCCTATACAAAGAACGTTCATAGTGTTGTTGAATATCTTCGAAATCTCACCCACACAAATCTTCAATCTCTAATTTTCTGTGGCGATCTAGACACGTCGATACCATATCTTAGCTCACTTTCTATTGTCAAGTCAATGAATTTGAATTTGGATAAGACTTGGCATCCATGGTTCGTTGATGGTGAAGTCGCAGGATATACGGAGGAATACAAAAGAAGTGAGTATCACCTGACCTACACCATTGTTAAGGGAGGGTGCCATGTACCTCAAGAGAACAAGCCTAAAGAGGCATATGAGATGATCGATAGATGGTTATCGTCTCATGATATATGA 993 0.3615 MSNNSIFVICLYFFQILNILYVDAPVGTGYSYSKTQEGYYSSDTQFVEHIYDFLQKWLVNHPKFRSNPLYIGGGSYSGKIIPPLVQKIYEYYKVGHSPIRNIQGFVLSSPRLDSHMDNNSKVEFAHQRTLISDELYESIKSSCNGDYINRDPNNTNCTSDYEAFFELVRYINEFQIMEPSCMCGSYENQRILSKEFEGIRNRRFRCRGTKGHFQRCNRSMAYTKNVHSVVEYLRNLTHTNLQSLIFCGDLDTSIPYLSSLSIVKSMNLNLDKTWHPWFVDGEVAGYTEEYKRSEYHLTYTIVKGGCHVPQENKPKEAYEMIDRWLSSHDI. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02485 330 Gene3D - 201 329 - -
Seca1g02485 330 Gene3D alpha/beta hydrolase 13 183 IPR029058 -
Seca1g02485 330 PRINTS Carboxypeptidase C serine protease (S10) family signature 22 32 IPR001563 GO:0004185|GO:0006508
Seca1g02485 330 PRINTS Carboxypeptidase C serine protease (S10) family signature 297 310 IPR001563 GO:0004185|GO:0006508
Seca1g02485 330 PRINTS Carboxypeptidase C serine protease (S10) family signature 57 82 IPR001563 GO:0004185|GO:0006508
Seca1g02485 330 SUPERFAMILY alpha/beta-Hydrolases 15 328 IPR029058 -
Seca1g02485 330 Pfam Serine carboxypeptidase 16 326 IPR001563 GO:0004185|GO:0006508
Seca1g02485 330 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 311 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02485 Seca-Chr1 63297361 63300525 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02485 207 330 Calmodulin-binding Proteins AT2G22960 33.065 1.31e-21 89.0