Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02462 ATGGAGTTTGAAAATGAAGAAGAAGCATGGGTATTTTGGCGTGAATATGGTAAGAAAGCAGGTTTTGGAGTTAGAAGACAATACTCTAACACGAGAAAGGGAGACGGTGCTATAACTTCTTGTAGATATGTTTGTTGCAAGGAAGGGTTTCGAAGGCCAGATAAAAGAGATGGACAGGTAACCAAGCATAGAGCTCTGACTACAACTAATATTTTTGCAAGAGTTGGAGTGTCTCTATCAAAGAATGAAAAATTTGTAATACATGAGTTTGTAGAAGAACATAACCATCCATTACAACTTCAAGAGACAACGTCACATGCTTGCTTCACACCGTAA 336 0.381 MEFENEEEAWVFWREYGKKAGFGVRRQYSNTRKGDGAITSCRYVCCKEGFRRPDKRDGQVTKHRALTTTNIFARVGVSLSKNEKFVIHEFVEEHNHPLQLQETTSHACFTP. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02462 111 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 102 - -
Seca1g02462 111 Pfam FAR1 DNA-binding domain 12 99 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02462 Seca-Chr1 62239536 62239871 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02462 FAR1 1.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02462 - - aprc:113870350 158.688