Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02410 ATGGTGGTGTGGGCTGATTCGATTGGACTAGGGAGTAGGGACAGAGTTGAATGGCTTCACGTGGTGGCTGGATTTCTGGTTCCACATATTTTCAGGTTTGACAAAAGAATCACTGCTTTTCCTGAAGACAAGTTTGGAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTCAACTGCATTGTCTCTTCAGAACATACTAGCAGGCGTGCTCTAGCTACTGATGAATGGTTGACAGTTGAGGGATGGAACGATGTGTATGCTCTGGGTGATTGTGCTACCAGAAACCAGTGA 303 0.4587 MVVWADSIGLGSRDRVEWLHVVAGFLVPHIFRFDKRITAFPEDKFGRDGIDVKTGSMVVKVNCIVSSEHTSRRALATDEWLTVEGWNDVYALGDCATRNQ. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02410 100 Gene3D - 62 100 - -
Seca1g02410 100 SUPERFAMILY FAD/NAD(P)-binding domain 28 97 IPR036188 -
Seca1g02410 100 PANTHER NADH DEHYDROGENASE 69 99 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02410 Seca-Chr1 60106623 60108364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02410 33 100 Chloroplast and Mitochondria Gene Families AT4G21490 48.544 2.04e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02410 K03885 - gmx:100797657 87.4261