Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02376 ATGAACTTGGGTGCGGCCGAGGAAGAATCGGCTGCAGAAGAGGTTCATGTACCAACTGAAATTGATTGGCAAAAGCTTGATAAATCAAAGTTTTTCTTTCTTGGTGCATCCCTTTTCTCTGGAGTTTCAACAACTCTGTACCCAATTGTTGTGTTGAAAACTCGTCAGCAAGTAGCTCTATCTCAAGTTTCTTGCATCAAGACTGCAATTTCAATGATCAAGCTCGAGGGTTACCAAGCATTGTATAGAGGATTTGGGACTTCTTTGATGGGTACAATCCATGCTAGAGCCTTATATATGGCTGCCCTTGAGATTACCAAAAGTAATGTAGGTACTGCTACTCTTAGGTTTGGGTTACTGATGGATTCCTGGCAAGTGTACCAAAAGTCCAGCAGTTATAGAGTAAGTAAGATATCGTATCCACACTGA 429 0.4149 MNLGAAEEESAAEEVHVPTEIDWQKLDKSKFFFLGASLFSGVSTTLYPIVVLKTRQQVALSQVSCIKTAISMIKLEGYQALYRGFGTSLMGTIHARALYMAALEITKSNVGTATLRFGLLMDSWQVYQKSSSYRVSKISYPH. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02376 142 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 119 - -
Seca1g02376 142 Pfam Mitochondrial carrier protein 41 109 IPR018108 -
Seca1g02376 142 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 109 IPR018108 -
Seca1g02376 142 Gene3D Mitochondrial carrier domain 11 138 IPR023395 -
Seca1g02376 142 SUPERFAMILY Mitochondrial carrier 24 111 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02376 Seca-Chr1 58198440 58198868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02376 1 119 Chloroplast and Mitochondria Gene Families AT1G72820 69.748 2.63e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02376 K15121 - zju:107403560 189.119