Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02367 ATGGCTGCCAATTTCTGGACATCATCTCACTACAAGCACCTTTTGGATCAAGAAGATGTGGATATGGTGAATCCACTTGACAAAGAAAAGGGTGTCACACTTGAAGATTTTAAGCTCATTAAGATGCACATGGCCAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCCACTGCAGTTACATACATGAGGCGTGTATACACCAGGAAGAGTATGACAGAATATGATCCACGCCTGGTAGCTCCAACCTGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTCGGCTGCTTGTATTTTACATTAAAAAATTATATGCTGATGATAAGTATAGGTATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTCTAGAAGCACTGAACTATTACCTGGTTGTATTCCACCCCTACCGTTCCCTATCTCAGTAA 462 0.4069 MAANFWTSSHYKHLLDQEDVDMVNPLDKEKGVTLEDFKLIKMHMANYILKLAQQVKVRQRVVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADDKYRYEIKDILEMEMKILEALNYYLVVFHPYRSLSQ. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02367 153 PANTHER CYCLIN 29 152 IPR043198 GO:0006357|GO:0016538
Seca1g02367 153 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Seca1g02367 153 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Seca1g02367 153 Gene3D - 7 153 - -
Seca1g02367 153 SMART cyclin_7 46 136 IPR013763 -
Seca1g02367 153 FunFam cyclin-C1-2-like isoform X1 19 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02367 Seca-Chr1 58065433 58068554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02367 60 151 Core Cell Cycle Gene Families AT5G27620 32.609 1.70e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02367 K15161 - gmx:100784345 283.878