Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02328 ATGCACAGGGCTAGGGTTAGGGTTCCGGCGTCAGTGGCTCAGGTTCTGAAGCACGAGCTCTGCTTGATTTCGCTGGCAGTGGAAGGGTTCTATGACACGGACGTGGATTCCATGAAGTTCGCAGCGAAGATGGAGAGGGGAAGGAAGTGTGGTGCTATAGAGAAAGTTGTTAAGAGGAGACAAAGACGAATGATAAAAAATAGAGAATCAGCAGCAAGGTCTCGGGCTCGCAAGCAGGCCTACACTTTCGAACTAGAGGCTGAAGTTGAAAAACTTAAGGAAGCAGAAATTATGGAAATGCAGAAAAATAAGGTGAGTTCAAGCAATTCCCAGGGAGGTTTCAAATTTCTTGAAAATGCTAAGGATTTGCCAACCATTAGTAAGTCCAGAAACCAAACCCAAATTTGTTGGTTTAACTTCTTTTAG 426 0.446 MHRARVRVPASVAQVLKHELCLISLAVEGFYDTDVDSMKFAAKMERGRKCGAIEKVVKRRQRRMIKNRESAARSRARKQAYTFELEAEVEKLKEAEIMEMQKNKVSSSNSQGGFKFLENAKDLPTISKSRNQTQICWFNFF. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02328 141 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 94 IPR004827 GO:0003700|GO:0006355
Seca1g02328 141 CDD bZIP_plant_BZIP46 59 94 - -
Seca1g02328 141 SMART brlzneu 55 120 IPR004827 GO:0003700|GO:0006355
Seca1g02328 141 SUPERFAMILY Leucine zipper domain 59 95 IPR046347 GO:0003700|GO:0006355
Seca1g02328 141 Pfam SGT1 protein 1 46 IPR010770 -
Seca1g02328 141 Gene3D - 57 111 - -
Seca1g02328 141 Pfam bZIP transcription factor 59 95 IPR004827 GO:0003700|GO:0006355
Seca1g02328 141 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Seca1g02328 141 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 36 105 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02328 Seca-Chr1 56752126 56753399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02328 44 105 bZIP Transcription Factor Family AT3G19290 63.889 7.37e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca1g02328 bZIP_1 3.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02328 K14432 - mof:131156537 94.3597