Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02320 ATGGAGTTTGATAGTGTAGATGCAGCTTGTGAATTTTGGGTTAAATATGGTGAAAAGATAGGCTTTGGAGTTAGAAAACAATATTTCAACAAAAGGAAGAAAGATGGTTCCATTAGATCATGTAGATACGTTTGTTGTAAGGAAGGTCACCAAAATTCGGGTAAGAGATCCTTCTTGGTCAAGAACCCCAAGGCTTAG 198 0.3737 MEFDSVDAACEFWVKYGEKIGFGVRKQYFNKRKKDGSIRSCRYVCCKEGHQNSGKRSFLVKNPKA. 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02320 65 Pfam FAR1 DNA-binding domain 11 57 IPR004330 -
Seca1g02320 65 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02320 Seca-Chr1 56494826 56495023 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02320 FAR1 8.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02320 - - tpra:123886591 91.2781