Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02299 ATGGTGAGAGAGCAGAGGGTGGATTCCTTCTACGCCAAGCTGCGGGATTCGGCACTTTCCTCTTCTTCCTCTCCTGTTCTCATTTTTCCTTCAACCTCTGACGTAGACTCCCTCTGCGCCCTCAAAATCATCTTCCACATCCTCGAATCTGATTCCATCCAATACGCCTGCTACCCTGTGTCGTCTTTCCGCGAGATCCACAAATACGCAAACCCCACCGCAAACGACGACCCAATCTCCATCGTTTTAATCAATTGGGGAAACCACAGGGACCTCCGCAAAACACTCAACTTAGTCCCAAACGCTCGCATCTTCGTCGTCGACAGCCACCGCCCCATCCACCTCCACAACCTCAACGACCAAAACGACACCGTCGTTGTTCTCTTCACTCAAGACGACGAAGACCAAGCAGATCTCGCCTACGACTTCCCTCTCTCCGCCCTAGCCAACGCCTCAACAAATTGGGACTCCGAATCCGAACCCGAAGACTCCGAATCCGAATCTGAATCCGAAAGCGACGAAGAAGAAGAATCTAAAAGAAAAAGAAAGAGAGACTCAGAAGATGACGAAGATCCGATTAAACTCTACAGGAAGAAGAAAAAAGAGTACTATCGATTGGGAACTTTTCACGGAAAACCCTCGGGGTGTTTGATGTATGAACTAGCCCATTTTCTGAGGAAGAACACGAACGAATTGCTCTGGCTTGCTTGCGTGGCGTTAACGGACCAGTTCGTTCACGAGAGGCTAAGCGATGAAAGGTACCACGCCGGCGTCATGGAGCTTGAACAATATATAAACAGTTCCGGCAATTTAGACGCCGTTACTTCGGTCACGCTCAAAGACGGTACCAAAATTCGTGCACCGAACTCATCTCGAATCGCCTACGAGGATGAACCGAGGCTCATGCTGTTACAGGAATGGAACCTCTTCGATTCTATGCTCTGTTCCTCCTACATCGCCACAAAATTGAAGACATGGAGCGACAATGGGATGAAGAAATTGAAGCTTCTGTTAGCTAGGATGGGGTTTGCACTCGCTGACTGTCAGCAGAAGTTTCAGTACATGAACGTTGAGGTAAAGCGGAAGATGAAGCATGAATTTGAGAGGTTTTTACCTGAATATGGTTTAACTGATTTATACTACCGAAGCTTTCTACGGATCCATGGGTATAGTTCAAGGGTCTCTGCTGCTGATGTGGTTTACGGTGTCACTGCACTTCTTGAGTCGTTTGTGAAATCGGATGGATCTTGTGCTTCAAAGCAGTTTGGGGTGGCCTATGATGCACTTTCCTTGAGCAATGTTGATAAGCTTAAAGCTGGGATGCAACACGCTATTAAGATTCAAAGGGCGATTTTGAGGCAAGGGAGCACTGCGATTATGAAAAATGGGTGCATTCGAAGTGGGAGGAAGTTTCGGTGGGTGAAGCTGGAAGATTCAGGGGATGCTAAGTTGTTGGGGTACCCTCAGGCTTTGACCAAATTCTGTTATTTTCTAATGGATGCTTTGAAAGAGAAAGGGGCGAGGATGAAGCCTTTGCTTTGTGCTTGTTTGTCTCAGGAACCGAATAAAGTGCTTATTGTTGGGGTTTGTGGGAGGCCGCGTTTGGCTGGGGCTCAGGGAAACGCGTTTGGGATGGCGTTTAGGAATGCTGCGGAGGAGATTGGAGCAGAGTTTTTTCATGAGTTGTTTGAGTCGTCGTGGATTTTTCTTGATACTTCCGCGGTGAATTCCTTCATGGTAAGGTTGACTGAGAAGCTGTGA 1761 0.4781 MVREQRVDSFYAKLRDSALSSSSSPVLIFPSTSDVDSLCALKIIFHILESDSIQYACYPVSSFREIHKYANPTANDDPISIVLINWGNHRDLRKTLNLVPNARIFVVDSHRPIHLHNLNDQNDTVVVLFTQDDEDQADLAYDFPLSALANASTNWDSESEPEDSESESESESDEEEESKRKRKRDSEDDEDPIKLYRKKKKEYYRLGTFHGKPSGCLMYELAHFLRKNTNELLWLACVALTDQFVHERLSDERYHAGVMELEQYINSSGNLDAVTSVTLKDGTKIRAPNSSRIAYEDEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALADCQQKFQYMNVEVKRKMKHEFERFLPEYGLTDLYYRSFLRIHGYSSRVSAADVVYGVTALLESFVKSDGSCASKQFGVAYDALSLSNVDKLKAGMQHAIKIQRAILRQGSTAIMKNGCIRSGRKFRWVKLEDSGDAKLLGYPQALTKFCYFLMDALKEKGARMKPLLCACLSQEPNKVLIVGVCGRPRLAGAQGNAFGMAFRNAAEEIGAEFFHELFESSWIFLDTSAVNSFMVRLTEKL. 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02299 586 PANTHER CDC45-RELATED PROTEIN 1 585 IPR003874 GO:0006270
Seca1g02299 586 Pfam CDC45-like protein 26 585 IPR003874 GO:0006270
Seca1g02299 586 MobiDBLite consensus disorder prediction 158 173 - -
Seca1g02299 586 MobiDBLite consensus disorder prediction 152 192 - -
Seca1g02299 586 MobiDBLite consensus disorder prediction 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02299 Seca-Chr1 55999732 56001492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02299 1 586 Core DNA Replication Machinery Family AT3G25100 71.927 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02299 K06628 - cave:132187530 947.962