Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02287 ATACTAATAACCTTTGAAGAAACTTATTATATTAAGGGGATAACAATCTATGCTTGTTGTGTATTAGAAGAACAAGCTCAGCCAGGGATATTGTATGCAATGGGTAGGATTGAGTTAGTTGAGAAAGTTGTGATTGCTCCAGAGCAACCAACACCCTGTAAGAGAATGTTCTTGTCTAATATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCCTCCTTTTTTGATCCTCCAAGCAACCAAATGAGCTTCTCTGAGATTTGTAGCAAATTATACAGTGCACTTAGTAAAATGCTTGTGCATTATGACTTTATGGCTGGCAGGCTAGTGCCAAGTCTGGAGGAGAATGATAGGTTTGAAATAGATTGTAATGATGCAGGTATAGTAGTTGTTGCTGCAAGAACTGATAAAAAGTTAGGCGAATTTGGTAGGATTTCTGCACCTAATCCAGAGTTAAGGGAATTAGTTGTTTTCTTGTATGAAGAGGGTGAAGAAGAAATCAACCTGAAAGAAAAGCCCCTTGCATCCTTACAGCTAACACAATTTGGTTGTGGAAGTTTAGCACTTGCTTCTCATTACAACCACTGCATATTGGATGGTATAGCAGTCAGAGATTTTGAGGTAAATTTGGCTGCTTTGACGCGTGGTGATGACCTTATCATAGTACCTAATGCAGATAGGACATTGCTAAGAGCTCAAAACCCTCCAAAGATAAGTCATCCACATTTTGAGTATTCAAAATCTACTGGCATAGAGAACTTGTTTACTATACGTGGTACAAGTGGCATCAATGCTAGACAATCCCTGGAAGAAAATCAAATTCATGTGCTTTATTTATCACCACAAAAGGTTGGCAGCTTTAAAAAGAAAGCTCTGAAGAACAGCAACTTAAAGAACAGCACCACTTTTCAAGTTATTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAACAAAGATGCCAGAGGATACAGTATCCACAATGTTGTTTCCAGTGGATGTTAGGAAAAGGATTGTTCCTGAACTTCCAGATGGATTTGCAGGCAATGCATTGGTTCCTGGCTTTGCAAGAGCAACTGTGAGGGAGCTCATGGAATTAGATGATGCTTGTCACATAAGGAAAGTACAAGAAGGGATTGAAAGATTGGATGATGAGTACATTAAGTCAGGTATAGATTGGTTAGAGGTGAACAGAGGGGTGCCTTGTAGGGATGACAGTTTTTCCTTGGTGGCATGGTGGAGATTGGGGCTAGAGGAGCAACTTTTTGCATGGGGTAAACTAAAATGTGCCACTCCACTTGCAGTTAAACCTGGTTTGGTCATGCTGTTGCCAGGGCCACAAGATGAAGGGGGTCTTAATATATGCCTAAATTTACCTGAGGATCAAATGCAAGAGTTTTGTAGGATAATGCTAGAAATTTAA 1422 0.3994 ILITFEETYYIKGITIYACCVLEEQAQPGILYAMGRIELVEKVVIAPEQPTPCKRMFLSNIDLSLVVYQDSASFFDPPSNQMSFSEICSKLYSALSKMLVHYDFMAGRLVPSLEENDRFEIDCNDAGIVVVAARTDKKLGEFGRISAPNPELRELVVFLYEEGEEEINLKEKPLASLQLTQFGCGSLALASHYNHCILDGIAVRDFEVNLAALTRGDDLIIVPNADRTLLRAQNPPKISHPHFEYSKSTGIENLFTIRGTSGINARQSLEENQIHVLYLSPQKVGSFKKKALKNSNLKNSTTFQVIAAKIWKARSIATKMPEDTVSTMLFPVDVRKRIVPELPDGFAGNALVPGFARATVRELMELDDACHIRKVQEGIERLDDEYIKSGIDWLEVNRGVPCRDDSFSLVAWWRLGLEEQLFAWGKLKCATPLAVKPGLVMLLPGPQDEGGLNICLNLPEDQMQEFCRIMLEI. 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02287 473 Gene3D - 33 247 IPR023213 -
Seca1g02287 473 Gene3D - 262 473 IPR023213 -
Seca1g02287 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 45 463 - -
Seca1g02287 473 Pfam Transferase family 37 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02287 Seca-Chr1 55693200 55695079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02287 36 473 Monolignol Biosynthesis Gene Families AT5G48930 27.293 1.55e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02287 K15400 - gmx:100801822 739.184