Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02247 ATGAAGTATGGAGGTATAAAAGGCTTTGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAAGATGGTTCCGTTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGAAAACCTGACTCAAGGGATTATAAAACGACCAATCCAAAACCCGAGACAAGAACGGGGTGTAGGGCAAGAATGAAAGTTAAACGATTCAATGAAAAATACAGAGTAATTAATTTTATTGATGATCACAATCACCCACTCCAACCACCAGAAACAGTGCATATGCAGAAAGCCTCGTTTGATTTTATGAGTAAATATGTAGGAGGTAGAGAGAATCTAGGGTATACTAGACAAGATGCAAAGAATTATTTGAATTCTAGGAGGCGGTGA 381 0.3727 MKYGGIKGFGVRKQYSSKSKKDGSVTSYLYVCCKEGVRKPDSRDYKTTNPKPETRTGCRARMKVKRFNEKYRVINFIDDHNHPLQPPETVHMQKASFDFMSKYVGGRENLGYTRQDAKNYLNSRRR. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02247 126 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 95 - -
Seca1g02247 126 MobiDBLite consensus disorder prediction 1 22 - -
Seca1g02247 126 Pfam FAR1 DNA-binding domain 2 86 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02247 Seca-Chr1 54306840 54307292 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02247 FAR1 1.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02247 - - vun:114184605 200.675