Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02184 ATGGGTCTCAGCAAGTGCACAAATTTGTTATTGGTTTTAATCACATTCTGCTTTTATTTTTCAGAATTCAGTGTTTCCATAGTCACCATCACATCATCCCAGTTCATCAAGGACCCTGAAACTCTAAGCTCCAATAGTGGTAACTTCACTTTTGGCTTCTTCAGCCCTGTAAATTCTACAAATCGCTACGTTGGAATTTGGTGGAAGCCCAAATTCACTGTCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTGCAGGGATTGTCACAATATCTGAAGATGGCAATCTTGTGGTATTGAATGGACAGAAACAAGTCATTTGGTCATCCAATGTGTCCCACCTTGGAACCAATTCAAGTTCCAAACTTTTAGATTCAGGGAACCTTGTACTGTTTCAAGGTATAACAGGAAGCACTGTATGGCAGAGTTTCGACCACCCTTCAAATACATTATTGTCTGGAATGAAACTTTCAAGCAATAAAAGAACAGGTGAGAAAGTAAAACTCACATCATGGAATACCCCTTCAGATCCATCCATTGGGAGCTTCTCTTTAAGTGTTGAACGTCTTAGTATACCTGAGTTGTTCATTTGGAATGGAACTAGTCCATTCTGGCGCACTGGCCCGTGGAATGGTAAGCTCTTTACTGGGGTGCCTGCGATGAGAACTTTCTATCTTGGTGGTTTTCGTGTTGGAGATGATGGCCAAGGAAGAGTTGAACTCTCTGGCACAGAAGTTGATGAGGTTGGTTTCATAATCTATATCCTGAATTCACAGGGGAATGTTCAAGAGAATTGGTGGGATGAAAAGAAGAAGGAATGGGAAGTAAGATGGAATAGTCATCAATTGGATTGTAATGTTTATGGTGTATGTGGGAATTTTGCAAGGTGTAGTTCAGAGAGCTCACCAATATGCAGCTGTTTGAGAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAGACAAAATTGGACTAGTGGGTGTGTTAGGAGGAAACCTCTGCAGTGTGAAAGAGTTAGCAATAAAAGCACAAGTGCAGACAATAAAGAAGATGGGTTTTTGAAACTGCAGATGATTAAAGTTCCAGATTTTGCAGATGGGTCATCTCTCACACTCACACCAGATACATGCAGAAGCCAGTGCTTGGGGAATTGCTCTTGTGTTGCTTATTCATATGATGCTGACATTGGTTGTATGTCTTGGACTGGGAATCTAATTGATATACAACAATTTTCAACGGGAGGACTTGATCTATATGTTCGTGTAGGCTACACTGAACTTGATAAAGAGAGAAACATGACAGCCATCATTACTATTGCAGTGACAGCAGGATCTGTCTTAATTCTCACTTCTTCATATGTCATGTGGAGAAGGATTTCTAACCACCATGCAAGAAAACAGAACATCAAAAGATTACTACAATTAAATAGAAGGAAAGCACCTGCAACATATACAAGTGACAATGTAATTGGAGAACTGTCACAAGCTAAACTCCAGGAGCTATTAATATTTGATTTTGGAAAGCTTGCAACTGCCACAAACAATTTTCACTCATCCAACAAACTTGGGAAGGGAGGTTTTGGTCTAGTATACAAGGGGCAACTGGAAGATGGTCAGGAAATAGCAATTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTGGAAGAATTCAAGAATGAAGTAATGGTAATTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTATTGAAGGAGAGGAAAAGATCTTGATATATGAGTACATGCCAAACAAAAGTTTGGATGCATTTCTCTTTGATCCATCAAAAAGTAAAACTCTTGATTGGAGAAAACGGTTTAGCATAATAGAAGGAACAGCTCGGGGATTGCTTTATCTTCATAGAGATTCGAGGCTAAAAATCATATATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATGAGGATCTAAATCCAAAAATATCCGACTTTGGTATGGCTAGAATCTTTGGTGGGAATGAGGATGAGGCCAACACTGGTAGAATTGTTGGAACATATGGCTATATGTCTCCTGAATATGCAATGCAAGGACTATTTTCTGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTACTGGAAATTGTTAGTGGAAGGAGAATTTCAAGATTTTATGACATTGAGAATTCTCTTACCCTTTTAGGATTTGTAAGTCTCTAA 2214 0.393 MGLSKCTNLLLVLITFCFYFSEFSVSIVTITSSQFIKDPETLSSNSGNFTFGFFSPVNSTNRYVGIWWKPKFTVIWVANRNQPLNDSAGIVTISEDGNLVVLNGQKQVIWSSNVSHLGTNSSSKLLDSGNLVLFQGITGSTVWQSFDHPSNTLLSGMKLSSNKRTGEKVKLTSWNTPSDPSIGSFSLSVERLSIPELFIWNGTSPFWRTGPWNGKLFTGVPAMRTFYLGGFRVGDDGQGRVELSGTEVDEVGFIIYILNSQGNVQENWWDEKKKEWEVRWNSHQLDCNVYGVCGNFARCSSESSPICSCLRGFEPRNKEEWNRQNWTSGCVRRKPLQCERVSNKSTSADNKEDGFLKLQMIKVPDFADGSSLTLTPDTCRSQCLGNCSCVAYSYDADIGCMSWTGNLIDIQQFSTGGLDLYVRVGYTELDKERNMTAIITIAVTAGSVLILTSSYVMWRRISNHHARKQNIKRLLQLNRRKAPATYTSDNVIGELSQAKLQELLIFDFGKLATATNNFHSSNKLGKGGFGLVYKGQLEDGQEIAIKRLSRASGQGLEEFKNEVMVICKLQHRNLVRLLGCCIEGEEKILIYEYMPNKSLDAFLFDPSKSKTLDWRKRFSIIEGTARGLLYLHRDSRLKIIYRDLKASNILLDEDLNPKISDFGMARIFGGNEDEANTGRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRISRFYDIENSLTLLGFVSL. 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02184 737 CDD PAN_AP_plant 335 424 - -
Seca1g02184 737 Pfam PAN-like domain 350 410 IPR003609 -
Seca1g02184 737 Gene3D Transferase(Phosphotransferase) domain 1 594 735 - -
Seca1g02184 737 Gene3D - 25 147 IPR036426 -
Seca1g02184 737 SMART ntp_6 350 424 IPR003609 -
Seca1g02184 737 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 593 - -
Seca1g02184 737 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 594 685 - -
Seca1g02184 737 SUPERFAMILY Protein kinase-like (PK-like) 502 725 IPR011009 -
Seca1g02184 737 CDD B_lectin 33 149 IPR001480 -
Seca1g02184 737 Pfam Protein tyrosine and serine/threonine kinase 520 716 IPR001245 GO:0004672|GO:0006468
Seca1g02184 737 ProSiteProfiles Protein kinase domain profile. 518 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g02184 737 Pfam D-mannose binding lectin 73 174 IPR001480 -
Seca1g02184 737 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Seca1g02184 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Seca1g02184 737 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Seca1g02184 737 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 214 IPR036426 -
Seca1g02184 737 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Seca1g02184 737 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 720 - -
Seca1g02184 737 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Seca1g02184 737 SMART serkin_6 518 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g02184 737 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Seca1g02184 737 PIRSF SRK 2 736 IPR024171 GO:0004674
Seca1g02184 737 Gene3D Phosphorylase Kinase; domain 1 480 593 - -
Seca1g02184 737 SMART blect_4 33 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02184 Seca-Chr1 51469601 51473474 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02184 427 735 Receptor kinase-like Gene Family AT4G05200 55.016 7.02e-103 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca1g02184 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02184 - - tpra:123892366 1029.24