Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g02165 | ATGGGTTTCAGCTGGAGCAAAAATATTTTCTCTGTTTCCATCATATTATGTTGTTATTTATTAGATGTTATTGTTGCCATAAACACCACCACATCCTTTCAAATCATCAAAGACCCTGGAACTCTAAGCTCAAATAATGGAAACTTTACCTTGGGGTTCTTCAGCCCTGAAAATTCTACAACACGCTATGTAGGAATTTGGTTCAAGTCTCAACAAACTGTGGTATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGGGTTGTTACAATATCTGATGATGGCCATCTTGTGGTGTTGAACGGAAAAAAAGAGGTAATTTGGTCATCAAACGTTGCCAATAATGCATCCAATTCTAGTTTCCATCTTTCAGATTATGGAAGCCTTGTCTTGATTGAAAACAAAACAGGAAACACCATATGGGAGAGTTTCAACCATCCTTCTAATACATTACTTCCCCATATGAAAATTACAAGCAATAAAATAACAGGTGAGAAAGTACAACTTACATCATGGAAAAGCCCTTCTAATCCATCCATTGGAAGCTTCTATGTCACTATTGAATGCCTAAAGGTTGCTCAATTGTTCGTTTGGAATGGAACAAGACCATACTGGCGTAGTGTTCCATGGAATGGTCAAGATATTATAGGGAAACCAGATATGGGAACTATGTATTTAAATGGTATTCATATTGAAAATGATAGGAACGGTCATGGGGATTGTGCATCTTTTATAGTAGATGAGTTTGGACTCTTGATCTATATGCTGAATTCACAAGGACAATTCAAGAGAATACTTGGAATGATGAGAAGGAGGAATGGCAAGTTACATGGACTAGTCAACAGTCAGATTGTGATGTATATGATGGTCAAAGTTCCTGATTTTGCAGAATGGTCATCTGTTACAATAGACACATGCAAAAGCCAGTGCTTGGAGAATTGCTTTTGCACTGCATATTCATATGATGTTGTTATGGGCTGTTTGTTTTGGATTTATGAAGGGCGAAAGAGAAACATGGCAGTCATCATTACAAGTCCATTGATAATAGGAATTTTCATAATCATCACTTGCGCGTATGTCATTTGGAGAAGAAGGACTTTGCACCTAGAAGAAAACACAAGTGATAATGTAATTGGAGAATTGTCACAAGCTAAGCTCCAGGAGCCATTACTACTTAATTTTGAAAAGCTTGCAACAGCCACTAACAACTTCCACTCATCCAACAAACTTGGTCAGGGTGGTTTTGGTCCAGTATACAAGGGGGTACTGCAAGATGGTAAGGAAATAGCAGTTAAAAGACTTTCTAGAGCATCAGGACTAGGGCTACAAGAATTCATGAATGAAGTGGTAGTGCTTTCTAAGCTTCAACACCGCAATCTTGTAAGGCTTCTAGGCTGTTGTATTGAAGGAGAGGAAAAGATGTTGATATATGAGTACATGCCAAATAAAAGTTTGGATGCATATCTCTTTGATCATTCAAAATATAAATTCTTGGATTGGAACAAACGCTTCAACATAATAGAAGGAATAGCTCGAGGACTGGTTTACCTTCATAGAGATTCAAGGCTAAAAATCATACATAGAGATTTGAAGGAAAGTAATATCTTGCTAGATGAGGAGCTGAATCCAAAAATTTCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGCCAATACCCAAAGGGTTGTTGGGACACATGGCTATATGTCCCCTGAATATGCAATGCATGGAGTGTTTTCAGAGAAATCAGATGTCTTTAGCTTTGGAGTGTTGCTAATAGAGATTGTTAGTGGAAGAAGAAACTCGAGTTTTTATGATGGTGAAAATTCTCTGACCCTCTTAGGATTTGCTTGGATACAATGGAGGGAAGGCAATATTTCATCTTTAATAGATCCGAGAATATATGATCCTATCCTCCATAAGAATATATGTAGGTGCATACACATAGGACTTTTGTTTGTACAAGAATTTGTTGTAGACAGGCCAACTATGGCTGCAGTAATTTCTATGCTTAATAGTGAGATTGTGGATCTTCCACCTGCAAGTCAACCAGCATTCTTTATGAGGAAAAATGTGTGA | 2097 | 0.3777 | MGFSWSKNIFSVSIILCCYLLDVIVAINTTTSFQIIKDPGTLSSNNGNFTLGFFSPENSTTRYVGIWFKSQQTVVWVANRNQPLNDSSGVVTISDDGHLVVLNGKKEVIWSSNVANNASNSSFHLSDYGSLVLIENKTGNTIWESFNHPSNTLLPHMKITSNKITGEKVQLTSWKSPSNPSIGSFYVTIECLKVAQLFVWNGTRPYWRSVPWNGQDIIGKPDMGTMYLNGIHIENDRNGHGDCASFIVDEFGLLIYMLNSQGQFKRILGMMRRRNGKLHGLVNSQIVMYMMVKVPDFAEWSSVTIDTCKSQCLENCFCTAYSYDVVMGCLFWIYEGRKRNMAVIITSPLIIGIFIIITCAYVIWRRRTLHLEENTSDNVIGELSQAKLQEPLLLNFEKLATATNNFHSSNKLGQGGFGPVYKGVLQDGKEIAVKRLSRASGLGLQEFMNEVVVLSKLQHRNLVRLLGCCIEGEEKMLIYEYMPNKSLDAYLFDHSKYKFLDWNKRFNIIEGIARGLVYLHRDSRLKIIHRDLKESNILLDEELNPKISDFGMARIFGGNEDQANTQRVVGTHGYMSPEYAMHGVFSEKSDVFSFGVLLIEIVSGRRNSSFYDGENSLTLLGFAWIQWREGNISSLIDPRIYDPILHKNICRCIHIGLLFVQEFVVDRPTMAAVISMLNSEIVDLPPASQPAFFMRKNV. | 699 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g02165 | 698 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 110 | 693 | - | - | |
Seca1g02165 | 698 | CDD | STKc_IRAK | 412 | 678 | - | - | |
Seca1g02165 | 698 | CDD | B_lectin | 34 | 149 | IPR001480 | - | |
Seca1g02165 | 698 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 527 | 539 | IPR008271 | GO:0004672|GO:0006468 | |
Seca1g02165 | 698 | ProSiteProfiles | Protein kinase domain profile. | 406 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g02165 | 698 | Gene3D | - | 24 | 147 | IPR036426 | - | |
Seca1g02165 | 698 | SMART | serkin_6 | 406 | 664 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g02165 | 698 | CDD | PAN_AP_plant | 291 | 335 | - | - | |
Seca1g02165 | 698 | PIRSF | SRK | 265 | 338 | IPR024171 | GO:0004674 | |
Seca1g02165 | 698 | PIRSF | SRK | 334 | 698 | IPR024171 | GO:0004674 | |
Seca1g02165 | 698 | PIRSF | SRK | 3 | 278 | IPR024171 | GO:0004674 | |
Seca1g02165 | 698 | SMART | blect_4 | 33 | 149 | IPR001480 | - | |
Seca1g02165 | 698 | ProSiteProfiles | Bulb-type lectin domain profile. | 27 | 146 | IPR001480 | - | |
Seca1g02165 | 698 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 64 | 180 | IPR036426 | - | |
Seca1g02165 | 698 | Gene3D | Transferase(Phosphotransferase) domain 1 | 482 | 683 | - | - | |
Seca1g02165 | 698 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 371 | 481 | - | - | |
Seca1g02165 | 698 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 23 | 146 | - | - | |
Seca1g02165 | 698 | Pfam | Protein tyrosine and serine/threonine kinase | 408 | 605 | IPR001245 | GO:0004672|GO:0006468 | |
Seca1g02165 | 698 | Gene3D | Phosphorylase Kinase; domain 1 | 369 | 481 | - | - | |
Seca1g02165 | 698 | Pfam | PAN-like domain | 291 | 333 | IPR003609 | - | |
Seca1g02165 | 698 | Pfam | D-mannose binding lectin | 73 | 175 | IPR001480 | - | |
Seca1g02165 | 698 | SUPERFAMILY | Protein kinase-like (PK-like) | 392 | 693 | IPR011009 | - | |
Seca1g02165 | 698 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 482 | 685 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g02165 | Seca-Chr1 | 50018127 | 50026574 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g02165 | 335 | 695 | Receptor kinase-like Gene Family | AT4G05200 | 50.685 | 2.92e-122 | 378 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca1g02165 | PK_Tyr_Ser-Thr | 2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g02165 | - | - | twl:120005476 | 739.184 |