Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02151 ATGGAGTTTAACACGATAGAAGAAGCTAGGAGGTTTTGGACAGATTATGGTGGAATGATTGGTTTTGATGTTAGGCAATTGTATGCAAATAAAAGCCGTGTAGATAAGTGTGTTAATACGGTAAGGTTTGTATGTGCAAAGGAAGGCTTTAGAAGACTTGACAAGCGAGATTTTCTGACAAAAACTCCTCGAGCAGAAACAAGAATTATTATATATTTAATTAATTAA 228 0.3421 MEFNTIEEARRFWTDYGGMIGFDVRQLYANKSRVDKCVNTVRFVCAKEGFRRLDKRDFLTKTPRAETRIIIYLIN. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02151 75 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 68 - -
Seca1g02151 75 Pfam FAR1 DNA-binding domain 11 69 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02151 Seca-Chr1 49074584 49074811 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02151 FAR1 8.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02151 - - adu:107484096 100.138