Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02133 ATGTCTCTTTCAAGACCCATTGAGGGCCGTAAACTTCAGCAATTGATGAAGGAAGGAGGAGCAGCAACGGGAACACCCTCTTCATGGAATAGGCTCAGCAGCAACCACAGAAACTCATTCCCTCCTTTACCTCCACACACGAGAAGCAAACTTGAAGATAGCGATGAAGATATGTTCACAGTTCCGGATGTGGAAGCAACACCAAGTAGTAACGTTAATCAAAGCAATGTGACAGATCCTCAGCTTCAAATTGGTGGCGTCGCCGGAAAGCGCCGCCGCGGAAAAAATCCAGTAGACAAGGAGTATAGACGCCTCAAGAGGCTGCTGAGGAACAGGGTTTCTGCCCAACAAGCTCGAGAAAGGAAAAAGGTATACGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGGAAGACAAGAATTCCAAGTTAGAAGAGTGTATATCGACTTTGATCAATGAGAACACCATGCTACGCAAGGTAATATGA 486 0.4588 MSLSRPIEGRKLQQLMKEGGAATGTPSSWNRLSSNHRNSFPPLPPHTRSKLEDSDEDMFTVPDVEATPSSNVNQSNVTDPQLQIGGVAGKRRRGKNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDKNSKLEECISTLINENTMLRKVI. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02133 161 MobiDBLite consensus disorder prediction 64 82 - -
Seca1g02133 161 Gene3D Single helix bin 122 161 - -
Seca1g02133 161 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 22 158 IPR044280 GO:0000981|GO:0045944
Seca1g02133 161 MobiDBLite consensus disorder prediction 20 42 - -
Seca1g02133 161 MobiDBLite consensus disorder prediction 1 97 - -
Seca1g02133 161 Pfam bZIP transcription factor 100 159 IPR004827 GO:0003700|GO:0006355
Seca1g02133 161 Coils Coil 119 153 - -
Seca1g02133 161 SMART brlzneu 99 160 IPR004827 GO:0003700|GO:0006355
Seca1g02133 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 106 121 IPR004827 GO:0003700|GO:0006355
Seca1g02133 161 SUPERFAMILY Leucine zipper domain 102 159 IPR046347 GO:0003700|GO:0006355
Seca1g02133 161 CDD bZIP_HY5-like 113 154 - -
Seca1g02133 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 101 161 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02133 Seca-Chr1 48332039 48334773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02133 77 161 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 72.727 5.56e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca1g02133 bZIP_1 1.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02133 K16241 - gmx:100783826 207.994