Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02118 ATGGATAATATAACTTTCCTTTTATGCAAAAGAATAACTAAGTTAACACCTTTGATTCAAGGCATTTATGAAGTTATTTGCTTGTGGAAAACATCAGCACTGTATGAGTGCACTGGGTATATATCACTTGAGCTGAAAGAATGTGTTTTCATCTTACATGATCTGCATATGGCAAGAAGGGGAGTATCTTTCCAAGCTACTTGGGAGAAATACAAGCAGCACAAGGTATTTAAACATGTGGTAAACATGTCTTCGCCTCCGCACTTACCAAGTCATCTCTTTGAATATTAG 291 0.3643 MDNITFLLCKRITKLTPLIQGIYEVICLWKTSALYECTGYISLELKECVFILHDLHMARRGVSFQATWEKYKQHKVFKHVVNMSSPPHLPSHLFEY. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02118 96 Pfam Cyclin, C-terminal domain 31 84 IPR004367 -
Seca1g02118 96 Gene3D - 6 90 - -
Seca1g02118 96 SUPERFAMILY Cyclin-like 30 78 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02118 Seca-Chr1 46579044 46580646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02118 34 95 Core Cell Cycle Gene Families AT5G43080 48.387 8.81e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02118 K06627 - gmx:100787417 89.3521