Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02110 TTCGCGAGAAACCCTTCCTCTGTGAAATCCCTCTTTGCTGCAAAACTGCTCCATCTGCGAAAGCCCTCGTTTGCTGCAAAGCCGTTCTCGCTGCACGTTCTTCATCTTCTGCTTGTTCTTATTTCTGGCACTGCTCCCGTTGTTCTTGGTCGATGTTGCCGCTCTCCCCGTTCCTGGCCATCGCCATTACAGAAAGCCCCTATTTTCTGCGTTATTGTCGCAGTTGTGGTTGTTACCCCTAACGAGGTCGAAGCCCTTAAACTAGGAAGGAGGTTTATTGGTATTGCTTGTGAGACTAAAAATGTGAGTTTGATTACTCATGTTGTATGTAAATGTGAGCTCCAAGTTTTGCAATTTGAGTTTTTGTGTTACTATCTTGCTGAACTAAGCTTGTTGGACTATTATTGTGTTAAGCCCTTGCATTCTTTGGTGGCTGCCGTTGTAGTATTTGTTGTTAGATTTATCGTTTGGCCTGAAGTTAATCCTTTGTTTAAACATGTGGTAAACATGTCTTCGCCCCCGCACTTACCAAGTCATCTCTTTGAACATTAG 552 0.4384 FARNPSSVKSLFAAKLLHLRKPSFAAKPFSLHVLHLLLVLISGTAPVVLGRCCRSPRSWPSPLQKAPIFCVIVAVVVVTPNEVEALKLGRRFIGIACETKNVSLITHVVCKCELQVLQFEFLCYYLAELSLLDYYCVKPLHSLVAAVVVFVVRFIVWPEVNPLFKHVVNMSSPPHLPSHLFEH. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02110 183 SUPERFAMILY Cyclin-like 118 159 IPR036915 -
Seca1g02110 183 Pfam Cyclin, C-terminal domain 116 167 IPR004367 -
Seca1g02110 183 Gene3D - 90 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02110 Seca-Chr1 46304768 46306218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02110 90 162 Core Cell Cycle Gene Families AT1G47230 46.575 3.28e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02110 K06627 - gmx:100776007 72.0182