Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02105 ATGGAATCCGTTAATGGCAATGGAGATCATGTTGTCAATGAGACGAGCAACAATGATAGACATGTTGGTGATTCAGAGGACAACGATCATCAAGAACCATTCATTGGAATGGAATTTCAGTTGCGGGAAGATGCTTATTCATTCTACACTCATTATGCTAAATGTGTTGGATTTGGCGTGTCTATTAAAACTAGTCGCCGTTCAAAAAGTTCTAGAGAATCCATTGATGTGAAATATGCTTACACGAGATATGGGAAGAAACGAGAATCCACGACACTTAATCCTCGTCCTTATTTCAAGGTTGAATGTGAGGCTAGACTACATATTAAAAGGAGTTGTAATGGAAAATGGATTGTTCACAGCTTCATCAATGATCACAATCATGAGCTTTTTCCGGCATATGCACATTATTTTCCTTGTCATAGAGGCATCAATCAAGCTCAAAAGGAATGCATTGAAACTTTGCAACATGTTGGAGTGATAACGGGCAAAATTTATGCCACGATGGCCAAACAACATGGAGGATATGAAAACATTGGCTGCTTGGAGAAATATATTAGAAATCATTTGGATGAGGATCGTCATTTAGCTTTAGAATCAGGAGATGCAAATGCAATGCTGGAATGTTTTATGCTCATGCAAAAAGAAAATCCAAGATTCTTTTATGAAATTGATTTGGATGATGAAGATCGTGTGAAAAATATATTTTGGGTGTATGCAAAAGGTAGAGATGACTATGAAGTGTTTGGAGATGTAATTTCATTTGATACAACATACATCACAAATAAGTATAAAATGCCATTTGCTCCATTCATTGGGGTGAATAATCACTTACAGTCAAGATTACTTGGTTGTGCATTATTAGCATATGAGTATTCATAA 882 0.3605 MESVNGNGDHVVNETSNNDRHVGDSEDNDHQEPFIGMEFQLREDAYSFYTHYAKCVGFGVSIKTSRRSKSSRESIDVKYAYTRYGKKRESTTLNPRPYFKVECEARLHIKRSCNGKWIVHSFINDHNHELFPAYAHYFPCHRGINQAQKECIETLQHVGVITGKIYATMAKQHGGYENIGCLEKYIRNHLDEDRHLALESGDANAMLECFMLMQKENPRFFYEIDLDDEDRVKNIFWVYAKGRDDYEVFGDVISFDTTYITNKYKMPFAPFIGVNNHLQSRLLGCALLAYEYS. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02105 293 MobiDBLite consensus disorder prediction 14 31 - -
Seca1g02105 293 MobiDBLite consensus disorder prediction 1 31 - -
Seca1g02105 293 Pfam FAR1 DNA-binding domain 47 132 IPR004330 -
Seca1g02105 293 PANTHER OS01G0519700 PROTEIN 24 264 - -
Seca1g02105 293 SUPERFAMILY WRKY DNA-binding domain 76 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca1g02105 293 ProSiteProfiles WRKY domain profile. 70 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca1g02105 293 Pfam MULE transposase domain 252 291 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02105 Seca-Chr1 45601814 45602695 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g02105 FAR1 1.3e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02105 - - mtr:112418473 457.603