Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02099 ATGGGAAAGTACATGAAGAAATCGAAAATCGCCGGCGACGTTGCCGCCGTGATCATGGAGGCTCCCTCTCACTCTTCAGTCGCCGTCGGCGTTCGCACCAGGGCAAAAACCCTAGCTCTCCAGAAATCGCCGCCTTCCGCGCCGCAACAATCGGACTCATCTGCTTACCTGCAGCTCCGCAGCCGCCGCCTCCGGAAGGTTCCTCCTCCTCCTCCGCCGTCTCGCAGGGAAACCGCCGTAGCCAATTCGAGGCTTCGAGAGAGTTCCGCTAAAACGGCGTCGTCGCCGCCCAGTGCTGAAAAGTTTGGACCTTTCTACGGGGAAGGGGAGAATGTTGATTTGGGTATGGAAGGTTCTTTCGGAGAAAATTTCTTGGAGGTTGAAGGCAGAGATAGAAGCACAAGGGAAAGCACACCTTGTAGTTTAATAAGGGATTCAAGTGCCATTCATACCCCTGGTTCAACCACAAGGCAAAGGACGCACCGAATGATTCATGAACACATGCAAAGAAATATTCCTGCGGCTTATGAAATGGAGGAGTTCTTTGCTTATGCAGAGAAGCAGCAACAAACAATATTTATGGACAAGTACAATTTCGACGTTGTCAATGAAGTACCTCTGCCTGGACGGTACGAATGGGTCCCTGTACTTCACTAA 657 0.5145 MGKYMKKSKIAGDVAAVIMEAPSHSSVAVGVRTRAKTLALQKSPPSAPQQSDSSAYLQLRSRRLRKVPPPPPPSRRETAVANSRLRESSAKTASSPPSAEKFGPFYGEGENVDLGMEGSFGENFLEVEGRDRSTRESTPCSLIRDSSAIHTPGSTTRQRTHRMIHEHMQRNIPAAYEMEEFFAYAEKQQQTIFMDKYNFDVVNEVPLPGRYEWVPVLH. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02099 218 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 216 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca1g02099 218 Pfam Cyclin-dependent kinase inhibitor 171 216 IPR003175 GO:0004861|GO:0005634|GO:0051726
Seca1g02099 218 PIRSF CKI_KRP_plant 1 218 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca1g02099 218 MobiDBLite consensus disorder prediction 39 108 - -
Seca1g02099 218 MobiDBLite consensus disorder prediction 39 58 - -
Seca1g02099 218 Gene3D p27 153 218 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02099 Seca-Chr1 45310303 45313357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02099 1 216 Core Cell Cycle Gene Families AT5G48820 44.082 4.37e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02099 - - aprc:113863524 287.345