Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g02070 ATGTTGTTTGTGAACACAAAGGATCAAGGGAGGATCGTCTTCTTTTTAGGAGCTATTATCTCTGGATGTTCAGCTGGAGGGTTGACTTCAGTACTGCATTGTGATCGTTTTCGAGCTCTTTTACCATCAGGAGCTAAAGTGAAGTGCCTTTCAGATGCTGGTTACTTTATCAATGCACAAGCTCCTTTAATATGCTTTCTACTTAGCATTTACCTAAATTCTTTTAGAGTTCCTTAG 237 0.3924 MLFVNTKDQGRIVFFLGAIISGCSAGGLTSVLHCDRFRALLPSGAKVKCLSDAGYFINAQAPLICFLLSIYLNSFRVP. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g02070 78 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Seca1g02070 78 PANTHER NOTUM-RELATED 18 60 IPR004963 GO:0016787
Seca1g02070 78 Pfam Pectinacetylesterase 18 60 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g02070 Seca-Chr1 43697075 43698133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g02070 17 60 Carbohydrate Esterase AT4G19420 70.455 2.14e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g02070 K19882 - gmx:100818146 85.8853